Analysis of interatomic Contacts of Structural Units in PDB entry:
9KH5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KH5 entry

There is 1 chain in PDB entry 9KH5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 38ALA 492
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 9KH5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 48Right-handed alpha
Helix 2
AA2
A
53 56Right-handed 310
Helix 3
AA3
A
57 67Right-handed alpha
Helix 4
AA4
A
68 97Right-handed alpha
Helix 5
AA5
A
104 112Right-handed alpha
Helix 6
AA6
A
113 126Right-handed alpha
Helix 7
AA7
A
126 145Right-handed alpha
Helix 8
AA8
A
154 174Right-handed alpha
Helix 9
AA9
A
177 209Right-handed alpha
Helix 10
AB1
A
226 240Right-handed alpha
Helix 11
AB2
A
257 285Right-handed alpha
Helix 12
AB3
A
286 293Right-handed alpha
Helix 13
AB4
A
295 305Right-handed alpha
Helix 14
AB5
A
311 340Right-handed alpha
Helix 15
AB6
A
358 374Right-handed alpha
Helix 16
AB7
A
377 406Right-handed alpha
Helix 17
AB8
A
418 434Right-handed alpha
Helix 18
AB9
A
439 461Right-handed alpha
Helix 19
AC1
A
466 488Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9KH5.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 352first strand
Strand 2
A
489 490anti-parallel
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