Analysis of interatomic Contacts of Structural Units in PDB entry:
9KK6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KK6 entry

There is 1 chain in PDB entry 9KK6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 21ILE 1252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 9KK6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 30Right-handed 310
Helix 2
AA2
A
34 67Right-handed alpha
Helix 3
AA3
A
67 72Right-handed alpha
Helix 4
AA4
A
75 128Right-handed alpha
Helix 5
AA5
A
131 138Right-handed alpha
Helix 6
AA6
A
140 159Right-handed alpha
Helix 7
AA7
A
160 184Right-handed alpha
Helix 8
AA8
A
184 194Right-handed alpha
Helix 9
AA9
A
194 233Right-handed alpha
Helix 10
AB1
A
233 240Right-handed alpha
Helix 11
AB2
A
242 254Right-handed alpha
Helix 12
AB3
A
255 297Right-handed alpha
Helix 13
AB4
A
301 344Right-handed alpha
Helix 14
AB5
A
405 414Right-handed alpha
Helix 15
AB6
A
435 442Right-handed alpha
Helix 16
AB7
A
456 463Right-handed alpha
Helix 17
AB8
A
469 480Right-handed alpha
Helix 18
AB9
A
482 488Right-handed alpha
Helix 19
AC1
A
498 502Right-handed 310
Helix 20
AC2
A
505 521Right-handed alpha
Helix 21
AC3
A
536 550Right-handed alpha
Helix 22
AC4
A
584 592Right-handed alpha
Helix 23
AC5
A
594 607Right-handed alpha
Helix 24
AC6
A
672 679Right-handed alpha
Helix 25
AC7
A
683 718Right-handed alpha
Helix 26
AC8
A
722 774Right-handed alpha
Helix 27
AC9
A
775 780Right-handed alpha
Helix 28
AD1
A
785 829Right-handed alpha
Helix 29
AD2
A
830 838Right-handed alpha
Helix 30
AD3
A
839 878Right-handed alpha
Helix 31
AD4
A
878 885Right-handed alpha
Helix 32
AD5
A
887 942Right-handed alpha
Helix 33
AD6
A
945 964Right-handed alpha
Helix 34
AD7
A
965 975Right-handed alpha
Helix 35
AD8
A
976 989Right-handed alpha
Helix 36
AD9
A
1052 1059Right-handed alpha
Helix 37
AE1
A
1080 1087Right-handed alpha
Helix 38
AE2
A
1101 1107Right-handed alpha
Helix 39
AE3
A
1114 1125Right-handed alpha
Helix 40
AE4
A
1127 1134Right-handed alpha
Helix 41
AE5
A
1136 1140Right-handed 310
Helix 42
AE6
A
1150 1166Right-handed alpha
Helix 43
AE7
A
1183 1195Right-handed alpha
Helix 44
AE8
A
1196 1198Right-handed 310
Helix 45
AE9
A
1229 1236Right-handed alpha
Helix 46
AF1
A
1239 1252Right-handed alpha
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There are 5 sheets in PDB entry 9KK6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
383 390first strand
Strand 2
A
365 372anti-parallel
Strand 3
A
421 426anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
443 446first strand
Strand 2
A
524 527parallel
Strand 3
A
554 558parallel
Strand 4
A
395 399parallel
Strand 5
A
570 574parallel
Strand 6
A
579 583anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1028 1031first strand
Strand 2
A
1010 1017anti-parallel
Strand 3
A
1034 1035anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1028 1031first strand
Strand 2
A
1010 1017anti-parallel
Strand 3
A
1066 1070anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1088 1090first strand
Strand 2
A
1169 1171parallel
Strand 3
A
1199 1200parallel
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