Analysis of interatomic Contacts of Structural Units in PDB entry:
9KL0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KL0 entry

There are 4 chains in PDB entry 9KL0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 18ALA 672
B
 ASN 26CYS 55
H
 UNK 1UNK 117
L
 UNK 1UNK 106
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9KL0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 44Right-handed alpha
Helix 2
AA2
A
77 92Right-handed alpha
Helix 3
AA3
A
95 112Right-handed alpha
Helix 4
AA4
A
113 118Right-handed alpha
Helix 5
AA5
A
126 134Right-handed alpha
Helix 6
AA6
A
136 154Right-handed alpha
Helix 7
AA7
A
155 171Right-handed alpha
Helix 8
AA8
A
173 191Right-handed alpha
Helix 9
AA9
A
192 197Right-handed alpha
Helix 10
AB1
A
198 200Right-handed 310
Helix 11
AB2
A
201 206Right-handed alpha
Helix 12
AB3
A
207 222Right-handed alpha
Helix 13
AB4
A
224 233Right-handed alpha
Helix 14
AB5
A
234 236Right-handed 310
Helix 15
AB6
A
275 287Right-handed alpha
Helix 16
AB7
A
311 323Right-handed alpha
Helix 17
AB8
A
323 328Right-handed alpha
Helix 18
AB9
A
328 339Right-handed alpha
Helix 19
AC1
A
339 344Right-handed alpha
Helix 20
AC2
A
347 355Right-handed alpha
Helix 21
AC3
A
361 363Right-handed 310
Helix 22
AC4
A
364 374Right-handed alpha
Helix 23
AC5
A
377 409Right-handed alpha
Helix 24
AC6
A
409 414Right-handed alpha
Helix 25
AC7
A
420 446Right-handed alpha
Helix 26
AC8
A
451 477Right-handed alpha
Helix 27
AC9
A
481 501Right-handed alpha
Helix 28
AD1
A
501 506Right-handed alpha
Helix 29
AD2
A
518 523Right-handed alpha
Helix 30
AD3
A
525 549Right-handed alpha
Helix 31
AD4
A
650 671Right-handed alpha
Helix 32
AD5
B
28 54Right-handed alpha
Helix 33
AD6
H
87 91Right-handed 310
Helix 34
AD7
H
101 104Right-handed 310
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There are 5 sheets in PDB entry 9KL0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
4 6first strand
Strand 2
H
17 24anti-parallel
Strand 3
H
78 84anti-parallel
Strand 4
H
68 73anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
57 60first strand
Strand 2
H
45 52anti-parallel
Strand 3
H
33 39anti-parallel
Strand 4
H
92 99anti-parallel
Strand 5
H
106 109anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
57 60first strand
Strand 2
H
45 52anti-parallel
Strand 3
H
33 39anti-parallel
Strand 4
H
92 99anti-parallel
Strand 5
H
113 115anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
5 6first strand
Strand 2
L
19 24anti-parallel
Strand 3
L
70 75anti-parallel
Strand 4
L
62 67anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 12first strand
Strand 2
L
103 105parallel
Strand 3
L
84 89anti-parallel
Strand 4
L
34 39anti-parallel
Strand 5
L
44 49anti-parallel
Strand 6
L
53 54anti-parallel
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