Analysis of interatomic Contacts of Structural Units in PDB entry:
9KL6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KL6 entry

There is 1 chain in PDB entry 9KL6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3TRP 451
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 9KL6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 22Right-handed alpha
Helix 2
AA2
A
24 29Right-handed alpha
Helix 3
AA3
A
30 34Right-handed 310
Helix 4
AA4
A
35 40Right-handed alpha
Helix 5
AA5
A
87 106Right-handed alpha
Helix 6
AA6
A
124 140Right-handed alpha
Helix 7
AA7
A
141 143Right-handed 310
Helix 8
AA8
A
157 173Right-handed alpha
Helix 9
AA9
A
191 212Right-handed alpha
Helix 10
AB1
A
229 242Right-handed alpha
Helix 11
AB2
A
265 278Right-handed alpha
Helix 12
AB3
A
281 284Right-handed 310
Helix 13
AB4
A
285 292Right-handed alpha
Helix 14
AB5
A
320 330Right-handed alpha
Helix 15
AB6
A
344 358Right-handed alpha
Helix 16
AB7
A
365 370Right-handed alpha
Helix 17
AB8
A
371 387Right-handed alpha
Helix 18
AB9
A
391 418Right-handed alpha
Helix 19
AC1
A
427 447Right-handed alpha
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There are 3 sheets in PDB entry 9KL6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 53first strand
Strand 2
A
59 70anti-parallel
Strand 3
A
111 116anti-parallel
Strand 4
A
80 82parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 77first strand
Strand 2
A
148 149parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 296first strand
Strand 2
A
254 257anti-parallel
Strand 3
A
245 250anti-parallel
Strand 4
A
222 225parallel
Strand 5
A
309 311parallel
Strand 6
A
334 336parallel
Strand 7
A
362 364parallel
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