Analysis of interatomic Contacts of Structural Units in PDB entry:
9KM3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KM3 entry

There is 1 chain in PDB entry 9KM3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 188ALA 755
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 9KM3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
191 201Right-handed alpha
Helix 2
AA2
A
202 207Right-handed alpha
Helix 3
AA3
A
207 216Right-handed alpha
Helix 4
AA4
A
221 232Right-handed alpha
Helix 5
AA5
A
232 248Right-handed alpha
Helix 6
AA6
A
252 257Right-handed 310
Helix 7
AA7
A
261 293Right-handed alpha
Helix 8
AA8
A
363 368Right-handed alpha
Helix 9
AA9
A
385 406Right-handed alpha
Helix 10
AB1
A
413 434Right-handed alpha
Helix 11
AB2
A
437 447Right-handed alpha
Helix 12
AB3
A
457 470Right-handed alpha
Helix 13
AB4
A
475 481Right-handed alpha
Helix 14
AB5
A
489 524Right-handed alpha
Helix 15
AB6
A
526 530Right-handed 310
Helix 16
AB7
A
537 547Right-handed alpha
Helix 17
AB8
A
551 586Right-handed alpha
Helix 18
AB9
A
590 594Right-handed 310
Helix 19
AC1
A
595 609Right-handed alpha
Helix 20
AC2
A
610 613Right-handed 310
Helix 21
AC3
A
616 628Right-handed alpha
Helix 22
AC4
A
629 647Right-handed alpha
Helix 23
AC5
A
649 662Right-handed alpha
Helix 24
AC6
A
666 675Right-handed alpha
Helix 25
AC7
A
675 691Right-handed alpha
Helix 26
AC8
A
703 719Right-handed alpha
Helix 27
AC9
A
719 732Right-handed alpha
Helix 28
AD1
A
735 744Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9KM3.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
696 697first strand
Strand 2
A
700 701anti-parallel
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