Analysis of interatomic Contacts of Structural Units in PDB entry:
9KM4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KM4 entry

There is 1 chain in PDB entry 9KM4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 177ASP 767
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 9KM4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
188 202Right-handed alpha
Helix 2
AA2
A
204 207Right-handed 310
Helix 3
AA3
A
208 216Right-handed alpha
Helix 4
AA4
A
218 220Right-handed 310
Helix 5
AA5
A
221 248Right-handed alpha
Helix 6
AA6
A
252 257Right-handed 310
Helix 7
AA7
A
262 293Right-handed alpha
Helix 8
AA8
A
298 302Right-handed 310
Helix 9
AA9
A
361 370Right-handed alpha
Helix 10
AB1
A
385 402Right-handed alpha
Helix 11
AB2
A
406 418Right-handed alpha
Helix 12
AB3
A
419 434Right-handed alpha
Helix 13
AB4
A
438 446Right-handed alpha
Helix 14
AB5
A
449 454Right-handed 310
Helix 15
AB6
A
455 470Right-handed alpha
Helix 16
AB7
A
475 482Right-handed alpha
Helix 17
AB8
A
489 520Right-handed alpha
Helix 18
AB9
A
526 531Right-handed alpha
Helix 19
AC1
A
536 541Right-handed alpha
Helix 20
AC2
A
541 547Right-handed alpha
Helix 21
AC3
A
551 586Right-handed alpha
Helix 22
AC4
A
590 592Right-handed 310
Helix 23
AC5
A
593 609Right-handed alpha
Helix 24
AC6
A
610 613Right-handed 310
Helix 25
AC7
A
616 628Right-handed alpha
Helix 26
AC8
A
632 647Right-handed alpha
Helix 27
AC9
A
649 661Right-handed alpha
Helix 28
AD1
A
666 675Right-handed alpha
Helix 29
AD2
A
676 691Right-handed alpha
Helix 30
AD3
A
703 719Right-handed alpha
Helix 31
AD4
A
719 732Right-handed alpha
Helix 32
AD5
A
735 743Right-handed alpha
Helix 33
AD6
A
754 758Right-handed 310
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There is 1 sheet (AA1) in PDB entry 9KM4.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
696 697first strand
Strand 2
A
700 701anti-parallel
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