Analysis of interatomic Contacts of Structural Units in PDB entry:
9KMQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KMQ entry

There are 2 chains in PDB entry 9KMQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLN 22THR 499
A
 GLN 22THR 499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 9KMQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
23 45Right-handed alpha
Helix 2
AA2
B
45 59Right-handed alpha
Helix 3
AA3
B
72 97Right-handed alpha
Helix 4
AA4
B
102 121Right-handed alpha
Helix 5
AA5
B
128 151Right-handed alpha
Helix 6
AA6
B
155 160Right-handed alpha
Helix 7
AA7
B
160 165Right-handed alpha
Helix 8
AA8
B
170 175Right-handed alpha
Helix 9
AA9
B
175 199Right-handed alpha
Helix 10
AB1
B
210 213Right-handed 310
Helix 11
AB2
B
214 229Right-handed alpha
Helix 12
AB3
B
229 242Right-handed alpha
Helix 13
AB4
B
294 300Right-handed alpha
Helix 14
AB5
B
300 323Right-handed alpha
Helix 15
AB6
B
323 331Right-handed alpha
Helix 16
AB7
B
336 340Right-handed 310
Helix 17
AB8
B
341 360Right-handed alpha
Helix 18
AB9
B
361 370Right-handed alpha
Helix 19
AC1
B
371 376Right-handed alpha
Helix 20
AC2
B
377 398Right-handed alpha
Helix 21
AC3
B
398 405Right-handed alpha
Helix 22
AC4
B
407 423Right-handed alpha
Helix 23
AC5
B
424 427Right-handed 310
Helix 24
AC6
B
440 462Right-handed alpha
Helix 25
AC7
B
462 468Right-handed alpha
Helix 26
AC8
B
471 493Right-handed alpha
Helix 27
AC9
A
23 45Right-handed alpha
Helix 28
AD1
A
49 58Right-handed alpha
Helix 29
AD2
A
72 97Right-handed alpha
Helix 30
AD3
A
102 122Right-handed alpha
Helix 31
AD4
A
128 149Right-handed alpha
Helix 32
AD5
A
156 162Right-handed alpha
Helix 33
AD6
A
168 175Right-handed alpha
Helix 34
AD7
A
176 200Right-handed alpha
Helix 35
AD8
A
210 213Right-handed 310
Helix 36
AD9
A
214 228Right-handed alpha
Helix 37
AE1
A
229 242Right-handed alpha
Helix 38
AE2
A
292 299Right-handed alpha
Helix 39
AE3
A
299 323Right-handed alpha
Helix 40
AE4
A
323 331Right-handed alpha
Helix 41
AE5
A
341 360Right-handed alpha
Helix 42
AE6
A
362 371Right-handed alpha
Helix 43
AE7
A
371 376Right-handed alpha
Helix 44
AE8
A
378 398Right-handed alpha
Helix 45
AE9
A
398 403Right-handed alpha
Helix 46
AF1
A
406 423Right-handed alpha
Helix 47
AF2
A
423 435Right-handed alpha
Helix 48
AF3
A
440 462Right-handed alpha
Helix 49
AF4
A
462 469Right-handed alpha
Helix 50
AF5
A
472 493Right-handed alpha
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There are no sheets in PDB entry 9KMQ
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