Analysis of interatomic Contacts of Structural Units in PDB entry:
9KO7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KO7 entry

There are 3 chains in PDB entry 9KO7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 VAL 21ASP 616
C
 VAL 21ASP 616
A
 ASP 20TYR 50
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are100 helices in PDB entry 9KO7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
21 52Right-handed alpha
Helix 2
AA2
B
55 82Right-handed alpha
Helix 3
AA3
B
83 88Right-handed 310
Helix 4
AA4
B
90 101Right-handed alpha
Helix 5
AA5
B
102 108Right-handed 310
Helix 6
AA6
B
109 129Right-handed alpha
Helix 7
AA7
B
146 155Right-handed alpha
Helix 8
AA8
B
157 172Right-handed alpha
Helix 9
AA9
B
176 194Right-handed alpha
Helix 10
AB1
B
198 205Right-handed alpha
Helix 11
AB2
B
206 208Right-handed 310
Helix 12
AB3
B
212 216Right-handed 310
Helix 13
AB4
B
219 253Right-handed alpha
Helix 14
AB5
B
266 268Right-handed 310
Helix 15
AB6
B
276 280Right-handed 310
Helix 16
AB7
B
294 301Right-handed alpha
Helix 17
AB8
B
304 319Right-handed alpha
Helix 18
AB9
B
325 332Right-handed alpha
Helix 19
AC1
B
366 386Right-handed alpha
Helix 20
AC2
B
387 389Right-handed 310
Helix 21
AC3
B
390 394Right-handed 310
Helix 22
AC4
B
398 414Right-handed alpha
Helix 23
AC5
B
415 422Right-handed alpha
Helix 24
AC6
B
432 448Right-handed alpha
Helix 25
AC7
B
449 466Right-handed alpha
Helix 26
AC8
B
473 487Right-handed alpha
Helix 27
AC9
B
499 503Right-handed 310
Helix 28
AD1
B
504 509Right-handed alpha
Helix 29
AD2
B
514 534Right-handed alpha
Helix 30
AD3
B
539 543Right-handed 310
Helix 31
AD4
B
549 560Right-handed alpha
Helix 32
AD5
B
566 576Right-handed alpha
Helix 33
AD6
B
582 600Right-handed alpha
Helix 34
AD7
C
22 53Right-handed alpha
Helix 35
AD8
C
55 83Right-handed alpha
Helix 36
AD9
C
84 88Right-handed 310
Helix 37
AE1
C
90 100Right-handed alpha
Helix 38
AE2
C
109 129Right-handed alpha
Helix 39
AE3
C
147 154Right-handed alpha
Helix 40
AE4
C
157 172Right-handed alpha
Helix 41
AE5
C
172 194Right-handed alpha
Helix 42
AE6
C
198 204Right-handed alpha
Helix 43
AE7
C
218 252Right-handed alpha
Helix 44
AE8
C
266 268Right-handed 310
Helix 45
AE9
C
276 278Right-handed 310
Helix 46
AF1
C
279 284Right-handed alpha
Helix 47
AF2
C
293 301Right-handed alpha
Helix 48
AF3
C
304 317Right-handed alpha
Helix 49
AF4
C
325 332Right-handed alpha
Helix 50
AF5
C
366 386Right-handed alpha
Helix 51
AF6
C
387 389Right-handed 310
Helix 52
AF7
C
390 394Right-handed 310
Helix 53
AF8
C
398 414Right-handed alpha
Helix 54
AF9
C
415 422Right-handed alpha
Helix 55
AG1
C
432 449Right-handed alpha
Helix 56
AG2
C
449 466Right-handed alpha
Helix 57
AG3
C
470 474Right-handed 310
Helix 58
AG4
C
475 485Right-handed alpha
Helix 59
AG5
C
499 503Right-handed 310
Helix 60
AG6
C
504 509Right-handed alpha
Helix 61
AG7
C
514 534Right-handed alpha
Helix 62
AG8
C
539 543Right-handed 310
Helix 63
AG9
C
548 562Right-handed alpha
Helix 64
AH1
C
563 565Right-handed 310
Helix 65
AH2
C
566 576Right-handed alpha
Helix 66
AH3
C
582 589Right-handed alpha
Helix 67
AH4
C
589 600Right-handed alpha
Helix 68
AH5
A
21 52Right-handed alpha
Helix 69
AH6
A
56 82Right-handed alpha
Helix 70
AH7
A
84 88Right-handed 310
Helix 71
AH8
A
90 101Right-handed alpha
Helix 72
AH9
A
102 108Right-handed 310
Helix 73
AI1
A
109 130Right-handed alpha
Helix 74
AI2
A
147 155Right-handed alpha
Helix 75
AI3
A
157 171Right-handed alpha
Helix 76
AI4
A
171 194Right-handed alpha
Helix 77
AI5
A
198 205Right-handed alpha
Helix 78
AI6
A
206 208Right-handed 310
Helix 79
AI7
A
218 253Right-handed alpha
Helix 80
AI8
A
276 278Right-handed 310
Helix 81
AI9
A
279 284Right-handed alpha
Helix 82
AJ1
A
294 302Right-handed alpha
Helix 83
AJ2
A
304 320Right-handed alpha
Helix 84
AJ3
A
325 332Right-handed alpha
Helix 85
AJ4
A
366 387Right-handed alpha
Helix 86
AJ5
A
388 389Right-handed 310
Helix 87
AJ6
A
390 394Right-handed 310
Helix 88
AJ7
A
398 415Right-handed alpha
Helix 89
AJ8
A
415 422Right-handed alpha
Helix 90
AJ9
A
432 447Right-handed alpha
Helix 91
AK1
A
449 467Right-handed alpha
Helix 92
AK2
A
470 472Right-handed 310
Helix 93
AK3
A
473 486Right-handed alpha
Helix 94
AK4
A
499 503Right-handed 310
Helix 95
AK5
A
504 509Right-handed alpha
Helix 96
AK6
A
513 534Right-handed alpha
Helix 97
AK7
A
539 543Right-handed 310
Helix 98
AK8
A
548 560Right-handed alpha
Helix 99
AK9
A
566 576Right-handed alpha
Helix 100
AL1
A
582 599Right-handed alpha
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There are 9 sheets in PDB entry 9KO7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 133first strand
Strand 2
B
141 142anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
263 264first strand
Strand 2
B
488 489parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 351first strand
Strand 2
B
357 360anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 133first strand
Strand 2
C
141 143anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
263 264first strand
Strand 2
C
488 489parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
348 351first strand
Strand 2
C
357 360anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
141 142anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 264first strand
Strand 2
A
488 489parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 353first strand
Strand 2
A
356 360anti-parallel
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