Analysis of interatomic Contacts of Structural Units in PDB entry:
9KP6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KP6 entry

There are 5 chains in PDB entry 9KP6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ILE 366
B
 THR 2ILE 366
C
 THR 2ILE 366
D
 THR 2ILE 366
E
 THR 2ILE 366
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 95 helices in PDB entry 9KP6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 10Right-handed 310
Helix 2
AA2
A
17 23Right-handed 310
Helix 3
AA3
A
27 32Right-handed alpha
Helix 4
AA4
A
32 45Right-handed alpha
Helix 5
AA5
A
56 59Right-handed 310
Helix 6
AA6
A
60 69Right-handed alpha
Helix 7
AA7
A
75 85Right-handed alpha
Helix 8
AA8
A
85 99Right-handed alpha
Helix 9
AA9
A
103 114Right-handed alpha
Helix 10
AB1
A
121 140Right-handed alpha
Helix 11
AB2
A
153 160Right-handed alpha
Helix 12
AB3
A
164 172Right-handed alpha
Helix 13
AB4
A
182 197Right-handed alpha
Helix 14
AB5
A
203 230Right-handed alpha
Helix 15
AB6
A
233 250Right-handed alpha
Helix 16
AB7
A
259 263Right-handed 310
Helix 17
AB8
A
274 295Right-handed alpha
Helix 18
AB9
A
309 324Right-handed alpha
Helix 19
AC1
A
361 366Right-handed 310
Helix 20
AC2
B
5 10Right-handed 310
Helix 21
AC3
B
17 23Right-handed 310
Helix 22
AC4
B
27 32Right-handed alpha
Helix 23
AC5
B
32 45Right-handed alpha
Helix 24
AC6
B
56 59Right-handed 310
Helix 25
AC7
B
60 69Right-handed alpha
Helix 26
AC8
B
75 85Right-handed alpha
Helix 27
AC9
B
85 99Right-handed alpha
Helix 28
AD1
B
103 114Right-handed alpha
Helix 29
AD2
B
121 140Right-handed alpha
Helix 30
AD3
B
153 160Right-handed alpha
Helix 31
AD4
B
164 172Right-handed alpha
Helix 32
AD5
B
182 197Right-handed alpha
Helix 33
AD6
B
203 230Right-handed alpha
Helix 34
AD7
B
233 250Right-handed alpha
Helix 35
AD8
B
259 263Right-handed 310
Helix 36
AD9
B
274 295Right-handed alpha
Helix 37
AE1
B
309 324Right-handed alpha
Helix 38
AE2
B
361 366Right-handed 310
Helix 39
AE3
C
5 10Right-handed 310
Helix 40
AE4
C
17 23Right-handed 310
Helix 41
AE5
C
27 32Right-handed alpha
Helix 42
AE6
C
32 45Right-handed alpha
Helix 43
AE7
C
56 59Right-handed 310
Helix 44
AE8
C
60 69Right-handed alpha
Helix 45
AE9
C
75 85Right-handed alpha
Helix 46
AF1
C
85 99Right-handed alpha
Helix 47
AF2
C
103 114Right-handed alpha
Helix 48
AF3
C
121 140Right-handed alpha
Helix 49
AF4
C
153 160Right-handed alpha
Helix 50
AF5
C
164 172Right-handed alpha
Helix 51
AF6
C
182 197Right-handed alpha
Helix 52
AF7
C
203 230Right-handed alpha
Helix 53
AF8
C
233 250Right-handed alpha
Helix 54
AF9
C
259 263Right-handed 310
Helix 55
AG1
C
274 295Right-handed alpha
Helix 56
AG2
C
309 325Right-handed alpha
Helix 57
AG3
C
361 366Right-handed 310
Helix 58
AG4
D
5 10Right-handed 310
Helix 59
AG5
D
17 23Right-handed 310
Helix 60
AG6
D
27 32Right-handed alpha
Helix 61
AG7
D
32 45Right-handed alpha
Helix 62
AG8
D
56 59Right-handed 310
Helix 63
AG9
D
60 69Right-handed alpha
Helix 64
AH1
D
75 85Right-handed alpha
Helix 65
AH2
D
85 99Right-handed alpha
Helix 66
AH3
D
103 114Right-handed alpha
Helix 67
AH4
D
121 140Right-handed alpha
Helix 68
AH5
D
153 160Right-handed alpha
Helix 69
AH6
D
164 172Right-handed alpha
Helix 70
AH7
D
182 197Right-handed alpha
Helix 71
AH8
D
203 230Right-handed alpha
Helix 72
AH9
D
233 250Right-handed alpha
Helix 73
AI1
D
259 263Right-handed 310
Helix 74
AI2
D
274 295Right-handed alpha
Helix 75
AI3
D
309 324Right-handed alpha
Helix 76
AI4
D
361 366Right-handed 310
Helix 77
AI5
E
5 10Right-handed 310
Helix 78
AI6
E
17 23Right-handed 310
Helix 79
AI7
E
27 32Right-handed alpha
Helix 80
AI8
E
32 45Right-handed alpha
Helix 81
AI9
E
56 59Right-handed 310
Helix 82
AJ1
E
60 69Right-handed alpha
Helix 83
AJ2
E
75 85Right-handed alpha
Helix 84
AJ3
E
85 99Right-handed alpha
Helix 85
AJ4
E
103 114Right-handed alpha
Helix 86
AJ5
E
121 140Right-handed alpha
Helix 87
AJ6
E
153 160Right-handed alpha
Helix 88
AJ7
E
164 172Right-handed alpha
Helix 89
AJ8
E
182 197Right-handed alpha
Helix 90
AJ9
E
203 230Right-handed alpha
Helix 91
AK1
E
233 250Right-handed alpha
Helix 92
AK2
E
259 263Right-handed 310
Helix 93
AK3
E
274 295Right-handed alpha
Helix 94
AK4
E
309 324Right-handed alpha
Helix 95
AK5
E
361 366Right-handed 310
Back to top of page
There are no sheets in PDB entry 9KP6
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il