Analysis of interatomic Contacts of Structural Units in PDB entry:
9KQJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KQJ entry

There are 2 chains in PDB entry 9KQJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 14HIS 408
B
 ASP 14HIS 408
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 9KQJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 22Right-handed alpha
Helix 2
AA2
A
34 39Right-handed 310
Helix 3
AA3
A
41 59Right-handed alpha
Helix 4
AA4
A
64 88Right-handed alpha
Helix 5
AA5
A
97 119Right-handed alpha
Helix 6
AA6
A
122 134Right-handed alpha
Helix 7
AA7
A
135 139Right-handed 310
Helix 8
AA8
A
160 165Right-handed alpha
Helix 9
AA9
A
166 184Right-handed alpha
Helix 10
AB1
A
185 203Right-handed alpha
Helix 11
AB2
A
213 220Right-handed alpha
Helix 12
AB3
A
224 242Right-handed alpha
Helix 13
AB4
A
255 265Right-handed alpha
Helix 14
AB5
A
266 268Right-handed 310
Helix 15
AB6
A
283 311Right-handed alpha
Helix 16
AB7
A
317 344Right-handed alpha
Helix 17
AB8
A
351 372Right-handed alpha
Helix 18
AB9
A
381 408Right-handed alpha
Helix 19
AC1
B
15 25Right-handed alpha
Helix 20
AC2
B
43 59Right-handed alpha
Helix 21
AC3
B
64 88Right-handed alpha
Helix 22
AC4
B
97 119Right-handed alpha
Helix 23
AC5
B
122 134Right-handed alpha
Helix 24
AC6
B
135 139Right-handed 310
Helix 25
AC7
B
160 165Right-handed alpha
Helix 26
AC8
B
166 184Right-handed alpha
Helix 27
AC9
B
185 203Right-handed alpha
Helix 28
AD1
B
213 219Right-handed alpha
Helix 29
AD2
B
219 224Right-handed alpha
Helix 30
AD3
B
224 242Right-handed alpha
Helix 31
AD4
B
255 265Right-handed alpha
Helix 32
AD5
B
266 268Right-handed 310
Helix 33
AD6
B
283 311Right-handed alpha
Helix 34
AD7
B
317 344Right-handed alpha
Helix 35
AD8
B
351 372Right-handed alpha
Helix 36
AD9
B
381 408Right-handed alpha
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There are no sheets in PDB entry 9KQJ
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