Analysis of interatomic Contacts of Structural Units in PDB entry:
9KR8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9KR8 entry

There are 3 chains in PDB entry 9KR8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 39	THR 1228
B	VAL 39	THR 1228
C	VAL 39	THR 1228

There are 83 helices in PDB entry 9KR8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	40	45	Right-handed alpha
Helix 2	AA2	A	56	60	Right-handed 310
Helix 3	AA3	A	230	239	Right-handed alpha
Helix 4	AA4	A	350	360	Right-handed alpha
Helix 5	AA5	A	422	426	Right-handed 310
Helix 6	AA6	A	437	442	Right-handed alpha
Helix 7	AA7	A	457	465	Right-handed 310
Helix 8	AA8	A	470	476	Right-handed alpha
Helix 9	AA9	A	532	537	Right-handed alpha
Helix 10	AB1	A	584	588	Right-handed 310
Helix 11	AB2	A	676	680	Right-handed 310
Helix 12	AB3	A	802	809	Right-handed alpha
Helix 13	AB4	A	811	819	Right-handed alpha
Helix 14	AB5	A	821	848	Right-handed alpha
Helix 15	AB6	A	849	853	Right-handed 310
Helix 16	AB7	A	869	872	Right-handed 310
Helix 17	AB8	A	885	893	Right-handed alpha
Helix 18	AB9	A	904	910	Right-handed alpha
Helix 19	AC1	A	922	928	Right-handed alpha
Helix 20	AC2	A	937	951	Right-handed alpha
Helix 21	AC3	A	968	979	Right-handed alpha
Helix 22	AC4	A	983	990	Right-handed alpha
Helix 23	AC5	A	990	1003	Right-handed alpha
Helix 24	AC6	A	1004	1009	Right-handed 310
Helix 25	AC7	A	1013	1036	Right-handed alpha
Helix 26	AC8	A	1037	1039	Right-handed 310
Helix 27	AC9	A	1047	1055	Right-handed alpha
Helix 28	AD1	A	1056	1104	Right-handed alpha
Helix 29	AD2	A	1220	1224	Right-handed 310
Helix 30	AD3	B	56	60	Right-handed 310
Helix 31	AD4	B	111	115	Right-handed 310
Helix 32	AD5	B	230	239	Right-handed alpha
Helix 33	AD6	B	350	360	Right-handed alpha
Helix 34	AD7	B	393	397	Right-handed alpha
Helix 35	AD8	B	437	442	Right-handed alpha
Helix 36	AD9	B	457	465	Right-handed 310
Helix 37	AE1	B	470	476	Right-handed alpha
Helix 38	AE2	B	532	537	Right-handed alpha
Helix 39	AE3	B	584	588	Right-handed 310
Helix 40	AE4	B	676	681	Right-handed alpha
Helix 41	AE5	B	802	809	Right-handed alpha
Helix 42	AE6	B	811	819	Right-handed alpha
Helix 43	AE7	B	821	848	Right-handed alpha
Helix 44	AE8	B	849	853	Right-handed 310
Helix 45	AE9	B	885	893	Right-handed alpha
Helix 46	AF1	B	904	910	Right-handed alpha
Helix 47	AF2	B	922	928	Right-handed alpha
Helix 48	AF3	B	937	951	Right-handed alpha
Helix 49	AF4	B	968	979	Right-handed alpha
Helix 50	AF5	B	983	990	Right-handed alpha
Helix 51	AF6	B	990	1003	Right-handed alpha
Helix 52	AF7	B	1004	1009	Right-handed 310
Helix 53	AF8	B	1013	1036	Right-handed alpha
Helix 54	AF9	B	1037	1039	Right-handed 310
Helix 55	AG1	B	1047	1055	Right-handed alpha
Helix 56	AG2	B	1056	1104	Right-handed alpha
Helix 57	AG3	C	40	44	Right-handed 310
Helix 58	AG4	C	56	60	Right-handed 310
Helix 59	AG5	C	230	239	Right-handed alpha
Helix 60	AG6	C	350	360	Right-handed alpha
Helix 61	AG7	C	422	426	Right-handed 310
Helix 62	AG8	C	437	442	Right-handed alpha
Helix 63	AG9	C	457	465	Right-handed 310
Helix 64	AH1	C	470	476	Right-handed alpha
Helix 65	AH2	C	532	537	Right-handed alpha
Helix 66	AH3	C	584	588	Right-handed 310
Helix 67	AH4	C	802	809	Right-handed alpha
Helix 68	AH5	C	811	819	Right-handed alpha
Helix 69	AH6	C	821	848	Right-handed alpha
Helix 70	AH7	C	849	853	Right-handed 310
Helix 71	AH8	C	885	893	Right-handed alpha
Helix 72	AH9	C	904	910	Right-handed alpha
Helix 73	AI1	C	922	928	Right-handed alpha
Helix 74	AI2	C	937	951	Right-handed alpha
Helix 75	AI3	C	968	979	Right-handed alpha
Helix 76	AI4	C	983	990	Right-handed alpha
Helix 77	AI5	C	990	1003	Right-handed alpha
Helix 78	AI6	C	1004	1009	Right-handed 310
Helix 79	AI7	C	1013	1036	Right-handed alpha
Helix 80	AI8	C	1037	1039	Right-handed 310
Helix 81	AI9	C	1047	1055	Right-handed alpha
Helix 82	AJ1	C	1056	1104	Right-handed alpha
Helix 83	AJ2	C	1220	1224	Right-handed 310

There are 56 sheets in PDB entry 9KR8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	64	first strand
Strand 2	A	285	292	parallel
Strand 3	A	270	276	anti-parallel
Strand 4	A	260	267	anti-parallel
Strand 5	A	123	127	anti-parallel
Strand 6	A	320	325	anti-parallel
Strand 7	A	90	93	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	82	first strand
Strand 2	A	327	335	anti-parallel
Strand 3	A	341	346	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	117	118	first strand
Strand 2	A	300	303	anti-parallel
Strand 3	A	154	157	anti-parallel
Strand 4	A	175	182	anti-parallel
Strand 5	A	187	197	anti-parallel
Strand 6	A	240	243	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	117	118	first strand
Strand 2	A	300	303	anti-parallel
Strand 3	A	154	157	anti-parallel
Strand 4	A	175	182	anti-parallel
Strand 5	A	187	197	anti-parallel
Strand 6	A	248	252	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	135	first strand
Strand 2	A	145	148	anti-parallel
Strand 3	A	317	318	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	162	first strand
Strand 2	A	169	172	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	367	374	first strand
Strand 2	A	655	662	anti-parallel
Strand 3	A	667	673	anti-parallel
Strand 4	A	709	712	anti-parallel
Strand 5	A	704	706	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	398	399	first strand
Strand 2	A	498	499	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	408	412	first strand
Strand 2	A	448	455	anti-parallel
Strand 3	A	566	574	anti-parallel
Strand 4	A	485	491	anti-parallel
Strand 5	A	427	434	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	415	416	first strand
Strand 2	A	582	583	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	519	521	first strand
Strand 2	A	504	514	anti-parallel
Strand 3	A	552	560	anti-parallel
Strand 4	A	545	549	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	601	606	first strand
Strand 2	A	609	617	anti-parallel
Strand 3	A	646	650	anti-parallel
Strand 4	A	636	640	anti-parallel
Strand 5	A	628	630	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	714	721	first strand
Strand 2	A	754	759	parallel
Strand 3	A	732	735	anti-parallel
Strand 4	A	727	729	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1118	1127	first strand
Strand 2	A	1130	1149	anti-parallel
Strand 3	A	1167	1171	anti-parallel
Strand 4	A	1185	1189	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1118	1127	first strand
Strand 2	A	1130	1149	anti-parallel
Strand 3	A	775	793	anti-parallel
Strand 4	C	964	965	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	798	801	first strand
Strand 2	A	929	932	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	862	863	first strand
Strand 2	A	866	867	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	964	965	first strand
Strand 2	B	775	793	anti-parallel
Strand 3	B	1130	1149	anti-parallel
Strand 4	B	1118	1127	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	964	965	first strand
Strand 2	B	775	793	anti-parallel
Strand 3	B	1130	1149	anti-parallel
Strand 4	B	1167	1171	anti-parallel
Strand 5	B	1185	1189	anti-parallel
Strand 6	B	1192	1196	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1203	1206	first strand
Strand 2	A	1161	1164	anti-parallel
Strand 3	A	1152	1153	anti-parallel
Strand 4	A	1213	1214	parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	64	first strand
Strand 2	B	285	292	parallel
Strand 3	B	270	276	anti-parallel
Strand 4	B	260	267	anti-parallel
Strand 5	B	123	127	anti-parallel
Strand 6	B	320	325	anti-parallel
Strand 7	B	90	93	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	82	first strand
Strand 2	B	327	335	anti-parallel
Strand 3	B	341	346	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	118	first strand
Strand 2	B	300	303	anti-parallel
Strand 3	B	154	157	anti-parallel
Strand 4	B	175	182	anti-parallel
Strand 5	B	187	197	anti-parallel
Strand 6	B	240	252	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	160	162	first strand
Strand 2	B	169	172	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	214	216	first strand
Strand 2	B	306	308	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	222	223	first strand
Strand 2	B	226	227	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	367	371	first strand
Strand 2	B	657	662	anti-parallel
Strand 3	B	667	673	anti-parallel
Strand 4	B	709	712	anti-parallel
Strand 5	B	704	706	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	398	399	first strand
Strand 2	B	498	499	parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	408	412	first strand
Strand 2	B	448	455	anti-parallel
Strand 3	B	566	574	anti-parallel
Strand 4	B	485	491	anti-parallel
Strand 5	B	427	434	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	415	416	first strand
Strand 2	B	582	583	parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	519	521	first strand
Strand 2	B	504	514	anti-parallel
Strand 3	B	552	560	anti-parallel
Strand 4	B	545	549	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	601	606	first strand
Strand 2	B	609	618	anti-parallel
Strand 3	B	646	650	anti-parallel
Strand 4	B	636	640	anti-parallel
Strand 5	B	628	630	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	714	721	first strand
Strand 2	B	754	759	parallel
Strand 3	B	732	735	anti-parallel
Strand 4	B	727	729	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	799	801	first strand
Strand 2	B	929	931	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	862	863	first strand
Strand 2	B	866	867	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	964	965	first strand
Strand 2	C	775	793	anti-parallel
Strand 3	C	1130	1149	anti-parallel
Strand 4	C	1118	1127	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	964	965	first strand
Strand 2	C	775	793	anti-parallel
Strand 3	C	1130	1149	anti-parallel
Strand 4	C	1167	1170	anti-parallel
Strand 5	C	1186	1189	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1152	1153	first strand
Strand 2	B	1213	1214	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1161	1164	first strand
Strand 2	B	1203	1206	anti-parallel

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There are 7 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	63	64	first strand
Strand 2	C	285	292	parallel
Strand 3	C	270	276	anti-parallel
Strand 4	C	260	267	anti-parallel
Strand 5	C	123	127	anti-parallel
Strand 6	C	320	325	anti-parallel
Strand 7	C	90	93	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	82	first strand
Strand 2	C	327	335	anti-parallel
Strand 3	C	341	346	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	99	100	first strand
Strand 2	C	103	104	anti-parallel

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There are 6 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	117	118	first strand
Strand 2	C	300	303	anti-parallel
Strand 3	C	154	157	anti-parallel
Strand 4	C	175	182	anti-parallel
Strand 5	C	187	197	anti-parallel
Strand 6	C	240	243	anti-parallel

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There are 6 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	117	118	first strand
Strand 2	C	300	303	anti-parallel
Strand 3	C	154	157	anti-parallel
Strand 4	C	175	182	anti-parallel
Strand 5	C	187	197	anti-parallel
Strand 6	C	248	252	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	162	first strand
Strand 2	C	169	172	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	214	216	first strand
Strand 2	C	306	308	parallel

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There are 5 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	367	371	first strand
Strand 2	C	657	662	anti-parallel
Strand 3	C	667	673	anti-parallel
Strand 4	C	709	712	anti-parallel
Strand 5	C	704	706	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	398	399	first strand
Strand 2	C	498	499	parallel

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There are 5 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	408	412	first strand
Strand 2	C	448	455	anti-parallel
Strand 3	C	566	574	anti-parallel
Strand 4	C	485	491	anti-parallel
Strand 5	C	427	434	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	415	416	first strand
Strand 2	C	582	583	parallel

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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	519	521	first strand
Strand 2	C	504	514	anti-parallel
Strand 3	C	552	560	anti-parallel
Strand 4	C	545	549	anti-parallel

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There are 5 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	601	606	first strand
Strand 2	C	609	617	anti-parallel
Strand 3	C	646	650	anti-parallel
Strand 4	C	636	640	anti-parallel
Strand 5	C	628	630	anti-parallel

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There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	714	721	first strand
Strand 2	C	754	759	parallel
Strand 3	C	732	735	anti-parallel
Strand 4	C	727	729	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	799	801	first strand
Strand 2	C	929	931	anti-parallel

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There are 2 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	862	863	first strand
Strand 2	C	866	867	anti-parallel

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There are 2 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1161	1164	first strand
Strand 2	C	1203	1206	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 9KR8

Analysis of interatomic Contacts of Structural Units in PDB entry:
9KR8