Analysis of interatomic Contacts of Structural Units in PDB entry:
9KRN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KRN entry

There is 1 chain in PDB entry 9KRN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 8LEU 1262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 9KRN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 38Right-handed alpha
Helix 2
AA2
A
48 51Right-handed 310
Helix 3
AA3
A
52 74Right-handed alpha
Helix 4
AA4
A
80 86Right-handed alpha
Helix 5
AA5
A
88 103Right-handed alpha
Helix 6
AA6
A
108 122Right-handed alpha
Helix 7
AA7
A
131 141Right-handed alpha
Helix 8
AA8
A
143 150Right-handed alpha
Helix 9
AA9
A
151 178Right-handed alpha
Helix 10
AB1
A
182 187Right-handed alpha
Helix 11
AB2
A
190 201Right-handed alpha
Helix 12
AB3
A
204 209Right-handed alpha
Helix 13
AB4
A
210 212Right-handed 310
Helix 14
AB5
A
218 229Right-handed alpha
Helix 15
AB6
A
230 232Right-handed 310
Helix 16
AB7
A
234 236Right-handed 310
Helix 17
AB8
A
237 242Right-handed alpha
Helix 18
AB9
A
246 281Right-handed alpha
Helix 19
AC1
A
282 290Right-handed alpha
Helix 20
AC2
A
292 326Right-handed alpha
Helix 21
AC3
A
327 342Right-handed alpha
Helix 22
AC4
A
347 390Right-handed alpha
Helix 23
AC5
A
698 706Right-handed alpha
Helix 24
AC6
A
710 744Right-handed alpha
Helix 25
AC7
A
760 806Right-handed alpha
Helix 26
AC8
A
810 816Right-handed alpha
Helix 27
AC9
A
817 835Right-handed alpha
Helix 28
AD1
A
835 861Right-handed alpha
Helix 29
AD2
A
862 865Right-handed 310
Helix 30
AD3
A
867 887Right-handed alpha
Helix 31
AD4
A
888 910Right-handed alpha
Helix 32
AD5
A
911 916Right-handed alpha
Helix 33
AD6
A
921 970Right-handed alpha
Helix 34
AD7
A
975 987Right-handed alpha
Helix 35
AD8
A
991 1014Right-handed alpha
Helix 36
AD9
A
1084 1089Right-handed alpha
Helix 37
AE1
A
1109 1115Right-handed alpha
Helix 38
AE2
A
1142 1153Right-handed alpha
Helix 39
AE3
A
1156 1161Right-handed alpha
Helix 40
AE4
A
1178 1194Right-handed alpha
Helix 41
AE5
A
1209 1222Right-handed alpha
Helix 42
AE6
A
1257 1262Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9KRN.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1117 1120first strand
Strand 2
A
1197 1200parallel
Strand 3
A
1228 1231parallel
Strand 4
A
1071 1075parallel
Strand 5
A
1243 1247parallel
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