Analysis of interatomic Contacts of Structural Units in PDB entry:
9KSZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KSZ entry

There is 1 chain in PDB entry 9KSZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3CYS 427
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 9KSZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 30Right-handed alpha
Helix 2
AA2
A
40 46Right-handed alpha
Helix 3
AA3
A
47 51Right-handed 310
Helix 4
AA4
A
71 75Right-handed 310
Helix 5
AA5
A
81 83Right-handed 310
Helix 6
AA6
A
84 94Right-handed alpha
Helix 7
AA7
A
95 107Right-handed alpha
Helix 8
AA8
A
119 127Right-handed alpha
Helix 9
AA9
A
138 144Right-handed alpha
Helix 10
AB1
A
145 147Right-handed 310
Helix 11
AB2
A
171 184Right-handed alpha
Helix 12
AB3
A
194 210Right-handed alpha
Helix 13
AB4
A
228 240Right-handed alpha
Helix 14
AB5
A
258 273Right-handed alpha
Helix 15
AB6
A
296 302Right-handed alpha
Helix 16
AB7
A
313 320Right-handed alpha
Helix 17
AB8
A
331 341Right-handed alpha
Helix 18
AB9
A
351 364Right-handed alpha
Helix 19
AC1
A
379 392Right-handed alpha
Helix 20
AC2
A
394 409Right-handed alpha
Helix 21
AC3
A
413 426Right-handed alpha
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There are 2 sheets in PDB entry 9KSZ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 61first strand
Strand 2
A
33 39parallel
Strand 3
A
5 10parallel
Strand 4
A
110 113parallel
Strand 5
A
131 135parallel
Strand 6
A
188 191parallel
Strand 7
A
212 215parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 308first strand
Strand 2
A
275 279parallel
Strand 3
A
246 250parallel
Strand 4
A
323 328parallel
Strand 5
A
345 347parallel
Strand 6
A
367 369parallel
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