Analysis of interatomic Contacts of Structural Units in PDB entry:
9KU2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KU2 entry

There is 1 chain in PDB entry 9KU2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 160PHE 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 9KU2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
165 169Right-handed 310
Helix 2
AA2
A
170 183Right-handed alpha
Helix 3
AA3
A
196 199Right-handed 310
Helix 4
AA4
A
202 204Right-handed 310
Helix 5
AA5
A
205 213Right-handed alpha
Helix 6
AA6
A
215 227Right-handed alpha
Helix 7
AA7
A
263 267Right-handed 310
Helix 8
AA8
A
292 294Right-handed 310
Helix 9
AA9
A
295 310Right-handed alpha
Helix 10
AB1
A
324 326Right-handed 310
Helix 11
AB2
A
327 342Right-handed alpha
Helix 12
AB3
A
346 356Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9KU2.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 194first strand
Strand 2
A
231 238parallel
Strand 3
A
241 248anti-parallel
Strand 4
A
253 257anti-parallel
Strand 5
A
313 317parallel
Strand 6
A
273 277parallel
Strand 7
A
281 283anti-parallel
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