Analysis of interatomic Contacts of Structural Units in PDB entry:
9KUQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KUQ entry

There is 1 chain in PDB entry 9KUQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4ARG 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 9KUQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 39Right-handed alpha
Helix 2
AA2
A
40 43Right-handed 310
Helix 3
AA3
A
44 52Right-handed alpha
Helix 4
AA4
A
58 69Right-handed alpha
Helix 5
AA5
A
76 101Right-handed alpha
Helix 6
AA6
A
120 138Right-handed alpha
Helix 7
AA7
A
140 162Right-handed alpha
Helix 8
AA8
A
171 183Right-handed alpha
Helix 9
AA9
A
183 198Right-handed alpha
Helix 10
AB1
A
201 227Right-handed alpha
Helix 11
AB2
A
240 246Right-handed alpha
Helix 12
AB3
A
249 257Right-handed alpha
Helix 13
AB4
A
263 271Right-handed alpha
Helix 14
AB5
A
276 289Right-handed alpha
Helix 15
AB6
A
290 313Right-handed alpha
Helix 16
AB7
A
317 333Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9KUQ.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 8first strand
Strand 2
A
11 12anti-parallel
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