Analysis of interatomic Contacts of Structural Units in PDB entry:
9KWI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KWI entry

There are 2 chains in PDB entry 9KWI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -1LEU 572
B
 THR 14GLY 629
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 9KWI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-1 11Right-handed alpha
Helix 2
AA2
A
13 45Right-handed alpha
Helix 3
AA3
A
50 99Right-handed alpha
Helix 4
AA4
A
102 110Right-handed alpha
Helix 5
AA5
A
112 119Right-handed alpha
Helix 6
AA6
A
119 135Right-handed alpha
Helix 7
AA7
A
137 154Right-handed alpha
Helix 8
AA8
A
157 203Right-handed alpha
Helix 9
AA9
A
203 210Right-handed alpha
Helix 10
AB1
A
212 239Right-handed alpha
Helix 11
AB2
A
240 266Right-handed alpha
Helix 12
AB3
A
271 294Right-handed alpha
Helix 13
AB4
A
296 313Right-handed alpha
Helix 14
AB5
A
373 382Right-handed alpha
Helix 15
AB6
A
393 397Right-handed 310
Helix 16
AB7
A
405 410Right-handed alpha
Helix 17
AB8
A
425 434Right-handed alpha
Helix 18
AB9
A
437 448Right-handed alpha
Helix 19
AC1
A
451 456Right-handed alpha
Helix 20
AC2
A
459 462Right-handed 310
Helix 21
AC3
A
473 488Right-handed alpha
Helix 22
AC4
A
503 518Right-handed alpha
Helix 23
AC5
A
519 521Right-handed 310
Helix 24
AC6
A
529 533Right-handed 310
Helix 25
AC7
A
552 560Right-handed alpha
Helix 26
AC8
A
560 571Right-handed alpha
Helix 27
AC9
B
16 29Right-handed alpha
Helix 28
AD1
B
34 72Right-handed alpha
Helix 29
AD2
B
77 88Right-handed alpha
Helix 30
AD3
B
91 99Right-handed alpha
Helix 31
AD4
B
109 160Right-handed alpha
Helix 32
AD5
B
161 167Right-handed alpha
Helix 33
AD6
B
169 178Right-handed alpha
Helix 34
AD7
B
178 213Right-handed alpha
Helix 35
AD8
B
213 222Right-handed alpha
Helix 36
AD9
B
222 262Right-handed alpha
Helix 37
AE1
B
262 269Right-handed alpha
Helix 38
AE2
B
271 299Right-handed alpha
Helix 39
AE3
B
299 326Right-handed alpha
Helix 40
AE4
B
329 372Right-handed alpha
Helix 41
AE5
B
429 438Right-handed alpha
Helix 42
AE6
B
456 458Right-handed 310
Helix 43
AE7
B
459 466Right-handed alpha
Helix 44
AE8
B
481 487Right-handed alpha
Helix 45
AE9
B
493 504Right-handed alpha
Helix 46
AF1
B
505 511Right-handed alpha
Helix 47
AF2
B
529 544Right-handed alpha
Helix 48
AF3
B
559 576Right-handed alpha
Helix 49
AF4
B
585 590Right-handed alpha
Helix 50
AF5
B
608 615Right-handed alpha
Helix 51
AF6
B
616 628Right-handed alpha
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There are 6 sheets in PDB entry 9KWI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 354first strand
Strand 2
A
337 341anti-parallel
Strand 3
A
389 391anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 414first strand
Strand 2
A
492 496parallel
Strand 3
A
522 526parallel
Strand 4
A
363 368parallel
Strand 5
A
538 543parallel
Strand 6
A
546 551anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 424first strand
Strand 2
A
464 465anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
407 414first strand
Strand 2
B
391 398anti-parallel
Strand 3
B
445 450anti-parallel
Strand 4
B
453 454anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
467 470first strand
Strand 2
B
548 552parallel
Strand 3
B
579 582parallel
Strand 4
B
420 423parallel
Strand 5
B
594 598parallel
Strand 6
B
603 607anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
479 480first strand
Strand 2
B
520 521anti-parallel
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