Analysis of interatomic Contacts of Structural Units in PDB entry:
9KWZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KWZ entry

There are 6 chains in PDB entry 9KWZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 29SER 245
B
 PHE 30SER 245
E
 GLN 30ALA 245
F
 GLN 30ALA 245
H
 GLN 1CYS 225
L
 ASP 1CYS 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9KWZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
116 120Right-handed 310
Helix 2
AA2
A
237 241Right-handed 310
Helix 3
AA3
B
197 199Right-handed 310
Helix 4
AA4
E
117 121Right-handed 310
Helix 5
AA5
E
239 243Right-handed 310
Helix 6
AA6
F
90 94Right-handed 310
Helix 7
AA7
F
238 242Right-handed 310
Helix 8
AA8
H
28 32Right-handed 310
Helix 9
AA9
H
197 201Right-handed 310
Helix 10
AB1
H
211 214Right-handed 310
Helix 11
AB2
L
123 127Right-handed 310
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There are 25 sheets in PDB entry 9KWZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
132 142parallel
Strand 3
A
121 129anti-parallel
Strand 4
A
63 66anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
A
109 112anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 157first strand
Strand 2
A
160 170anti-parallel
Strand 3
A
201 207anti-parallel
Strand 4
A
190 195anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 179first strand
Strand 2
A
216 223anti-parallel
Strand 3
A
228 235anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
47 53anti-parallel
Strand 3
B
107 112anti-parallel
Strand 4
B
96 99anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 41first strand
Strand 2
B
132 142parallel
Strand 3
B
121 129anti-parallel
Strand 4
B
63 64anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 157first strand
Strand 2
B
160 170anti-parallel
Strand 3
B
201 208anti-parallel
Strand 4
B
190 195anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 186first strand
Strand 2
B
175 179anti-parallel
Strand 3
B
216 223anti-parallel
Strand 4
B
228 235anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
33 34first strand
Strand 2
E
49 54anti-parallel
Strand 3
E
108 113anti-parallel
Strand 4
E
97 100anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
40 43first strand
Strand 2
E
134 144parallel
Strand 3
E
122 129anti-parallel
Strand 4
E
64 68anti-parallel
Strand 5
E
75 80anti-parallel
Strand 6
E
83 85anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
190 191first strand
Strand 2
E
202 210anti-parallel
Strand 3
E
195 196anti-parallel
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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
190 191first strand
Strand 2
E
202 210anti-parallel
Strand 3
E
162 171anti-parallel
Strand 4
E
151 154anti-parallel
Strand 5
F
229 236parallel
Strand 6
F
218 224anti-parallel
Strand 7
F
176 181anti-parallel
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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
186 187first strand
Strand 2
E
176 180anti-parallel
Strand 3
E
218 223anti-parallel
Strand 4
E
230 237anti-parallel
Strand 5
F
151 155parallel
Strand 6
F
162 169anti-parallel
Strand 7
F
203 210anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
32 33first strand
Strand 2
F
54 55anti-parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
40 41first strand
Strand 2
F
138 142parallel
Strand 3
F
122 125anti-parallel
Strand 4
F
65 69anti-parallel
Strand 5
F
75 80anti-parallel
Strand 6
F
83 85anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
128 130first strand
Strand 2
F
133 135anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
116 120parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
58 60anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
116 120parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
109 112anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
129 133first strand
Strand 2
H
144 154anti-parallel
Strand 3
H
185 194anti-parallel
Strand 4
H
172 174anti-parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
159 162first strand
Strand 2
H
206 209anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
5 7first strand
Strand 2
L
19 24anti-parallel
Strand 3
L
71 75anti-parallel
Strand 4
L
62 66anti-parallel
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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
53 54first strand
Strand 2
L
45 49anti-parallel
Strand 3
L
34 38anti-parallel
Strand 4
L
85 89anti-parallel
Strand 5
L
102 103anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
114 115first strand
Strand 2
L
129 137anti-parallel
Strand 3
L
174 182anti-parallel
Strand 4
L
162 164anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
154 155first strand
Strand 2
L
146 149anti-parallel
Strand 3
L
191 196anti-parallel
Strand 4
L
208 210anti-parallel
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