Analysis of interatomic Contacts of Structural Units in PDB entry:
9KXW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KXW entry

There are 2 chains in PDB entry 9KXW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 5HIS 609
B
 PRO 737ARG 768
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 35 helices in PDB entry 9KXW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 25Right-handed alpha
Helix 2
AA2
A
37 50Right-handed alpha
Helix 3
AA3
A
52 57Right-handed alpha
Helix 4
AA4
A
57 65Right-handed alpha
Helix 5
AA5
A
70 81Right-handed alpha
Helix 6
AA6
A
81 97Right-handed alpha
Helix 7
AA7
A
99 108Right-handed alpha
Helix 8
AA8
A
111 142Right-handed alpha
Helix 9
AA9
A
163 169Right-handed alpha
Helix 10
AB1
A
170 178Right-handed alpha
Helix 11
AB2
A
194 212Right-handed alpha
Helix 12
AB3
A
215 227Right-handed alpha
Helix 13
AB4
A
228 244Right-handed alpha
Helix 14
AB5
A
248 255Right-handed alpha
Helix 15
AB6
A
258 263Right-handed 310
Helix 16
AB7
A
264 279Right-handed alpha
Helix 17
AB8
A
284 291Right-handed alpha
Helix 18
AB9
A
299 348Right-handed alpha
Helix 19
AC1
A
356 359Right-handed 310
Helix 20
AC2
A
360 365Right-handed alpha
Helix 21
AC3
A
384 390Right-handed alpha
Helix 22
AC4
A
396 401Right-handed alpha
Helix 23
AC5
A
401 409Right-handed alpha
Helix 24
AC6
A
412 447Right-handed alpha
Helix 25
AC7
A
454 470Right-handed alpha
Helix 26
AC8
A
471 475Right-handed 310
Helix 27
AC9
A
477 487Right-handed alpha
Helix 28
AD1
A
491 508Right-handed alpha
Helix 29
AD2
A
510 523Right-handed alpha
Helix 30
AD3
A
527 536Right-handed alpha
Helix 31
AD4
A
536 553Right-handed alpha
Helix 32
AD5
A
554 556Right-handed 310
Helix 33
AD6
A
581 591Right-handed alpha
Helix 34
AD7
A
591 609Right-handed alpha
Helix 35
AD8
B
740 768Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 9KXW.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
559 562first strand
Strand 2
A
574 577anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il