Analysis of interatomic Contacts of Structural Units in PDB entry:
9KZ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9KZ6 entry

There is 1 chain in PDB entry 9KZ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 54PRO 1824
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 9KZ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 65Right-handed 310
Helix 2
AA2
A
75 83Right-handed alpha
Helix 3
AA3
A
322 335Right-handed alpha
Helix 4
AA4
A
341 345Right-handed 310
Helix 5
AA5
A
356 370Right-handed alpha
Helix 6
AA6
A
384 388Right-handed 310
Helix 7
AA7
A
399 409Right-handed alpha
Helix 8
AA8
A
432 442Right-handed alpha
Helix 9
AA9
A
470 486Right-handed alpha
Helix 10
AB1
A
545 550Right-handed alpha
Helix 11
AB2
A
552 569Right-handed alpha
Helix 12
AB3
A
584 588Right-handed 310
Helix 13
AB4
A
599 616Right-handed alpha
Helix 14
AB5
A
633 645Right-handed alpha
Helix 15
AB6
A
662 667Right-handed 310
Helix 16
AB7
A
670 686Right-handed alpha
Helix 17
AB8
A
686 701Right-handed alpha
Helix 18
AB9
A
707 711Right-handed 310
Helix 19
AC1
A
796 801Right-handed alpha
Helix 20
AC2
A
941 949Right-handed alpha
Helix 21
AC3
A
990 997Right-handed alpha
Helix 22
AC4
A
1191 1201Right-handed alpha
Helix 23
AC5
A
1207 1212Right-handed 310
Helix 24
AC6
A
1222 1236Right-handed alpha
Helix 25
AC7
A
1246 1254Right-handed 310
Helix 26
AC8
A
1259 1263Right-handed 310
Helix 27
AC9
A
1264 1275Right-handed alpha
Helix 28
AD1
A
1295 1304Right-handed alpha
Helix 29
AD2
A
1335 1343Right-handed alpha
Helix 30
AD3
A
1354 1370Right-handed alpha
Helix 31
AD4
A
1374 1378Right-handed 310
Helix 32
AD5
A
1405 1410Right-handed alpha
Helix 33
AD6
A
1445 1449Right-handed alpha
Helix 34
AD7
A
1451 1469Right-handed alpha
Helix 35
AD8
A
1499 1514Right-handed alpha
Helix 36
AD9
A
1531 1543Right-handed alpha
Helix 37
AE1
A
1560 1564Right-handed 310
Helix 38
AE2
A
1565 1597Right-handed alpha
Helix 39
AE3
A
1611 1617Right-handed 310
Helix 40
AE4
A
1692 1697Right-handed alpha
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There are 25 sheets in PDB entry 9KZ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 86first strand
Strand 2
A
97 98anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 107first strand
Strand 2
A
117 124anti-parallel
Strand 3
A
112 113anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 107first strand
Strand 2
A
117 124anti-parallel
Strand 3
A
137 146anti-parallel
Strand 4
A
149 156anti-parallel
Strand 5
A
313 320anti-parallel
Strand 6
A
283 288anti-parallel
Strand 7
A
270 276anti-parallel
Strand 8
A
230 234anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 187first strand
Strand 2
A
192 197anti-parallel
Strand 3
A
202 206anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 215first strand
Strand 2
A
218 224anti-parallel
Strand 3
A
303 308anti-parallel
Strand 4
A
294 299anti-parallel
Strand 5
A
249 252anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
621 622first strand
Strand 2
A
590 592parallel
Strand 3
A
576 578parallel
Strand 4
A
492 495parallel
Strand 5
A
413 418parallel
Strand 6
A
376 379parallel
Strand 7
A
347 351parallel
Strand 8
A
650 654parallel
Strand 9
A
624 625parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 423first strand
Strand 2
A
462 464anti-parallel
Strand 3
A
456 457anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
705 706first strand
Strand 2
A
725 727anti-parallel
Strand 3
A
731 734anti-parallel
Strand 4
A
779 783anti-parallel
Strand 5
A
753 755anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
743 748first strand
Strand 2
A
767 772anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
786 791first strand
Strand 2
A
805 810anti-parallel
Strand 3
A
865 872parallel
Strand 4
A
903 906anti-parallel
Strand 5
A
897 898anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
786 791first strand
Strand 2
A
805 810anti-parallel
Strand 3
A
865 872parallel
Strand 4
A
911 912anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
817 823first strand
Strand 2
A
838 845anti-parallel
Strand 3
A
853 856anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
817 823first strand
Strand 2
A
838 845anti-parallel
Strand 3
A
848 851anti-parallel
Strand 4
A
917 923anti-parallel
Strand 5
A
877 884anti-parallel
Strand 6
A
887 888anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
951 952first strand
Strand 2
A
963 964anti-parallel
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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
970 977first strand
Strand 2
A
981 988anti-parallel
Strand 3
A
1004 1013anti-parallel
Strand 4
A
1016 1022anti-parallel
Strand 5
A
1179 1184anti-parallel
Strand 6
A
1149 1154anti-parallel
Strand 7
A
1137 1143anti-parallel
Strand 8
A
1097 1102anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1050 1055first strand
Strand 2
A
1060 1065anti-parallel
Strand 3
A
1071 1074anti-parallel
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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1081 1083first strand
Strand 2
A
1086 1092anti-parallel
Strand 3
A
1169 1174anti-parallel
Strand 4
A
1160 1165anti-parallel
Strand 5
A
1116 1120anti-parallel
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There are 9 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1519 1520first strand
Strand 2
A
1488 1490parallel
Strand 3
A
1474 1476parallel
Strand 4
A
1383 1386parallel
Strand 5
A
1278 1283parallel
Strand 6
A
1242 1245parallel
Strand 7
A
1214 1215parallel
Strand 8
A
1549 1550parallel
Strand 9
A
1522 1523parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1287 1288first strand
Strand 2
A
1347 1348anti-parallel
Strand 3
A
1318 1319anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1434 1436first strand
Strand 2
A
1442 1444anti-parallel
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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1601 1602first strand
Strand 2
A
1621 1623anti-parallel
Strand 3
A
1627 1630anti-parallel
Strand 4
A
1675 1679anti-parallel
Strand 5
A
1649 1651anti-parallel
Strand 6
A
1657 1658anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1639 1644first strand
Strand 2
A
1663 1668anti-parallel
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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1682 1687first strand
Strand 2
A
1701 1706anti-parallel
Strand 3
A
1762 1769parallel
Strand 4
A
1800 1804anti-parallel
Strand 5
A
1791 1794anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1682 1687first strand
Strand 2
A
1701 1706anti-parallel
Strand 3
A
1762 1769parallel
Strand 4
A
1810 1811anti-parallel
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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1713 1719first strand
Strand 2
A
1734 1741anti-parallel
Strand 3
A
1744 1752anti-parallel
Strand 4
A
1815 1822anti-parallel
Strand 5
A
1776 1783anti-parallel
Strand 6
A
1787 1788anti-parallel
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