Analysis of interatomic Contacts of Structural Units in PDB entry:
9KZT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9KZT entry

There are 6 chains in PDB entry 9KZT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 233	ASN 718
B	LYS 41	VAL 551
C	ASN 233	ASN 718
D	LYS 41	VAL 551
E	ASN 233	ASN 718
F	LYS 41	VAL 551

There are 42 helices in PDB entry 9KZT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	248	255	Right-handed alpha
Helix 2	AA2	A	258	282	Right-handed alpha
Helix 3	AA3	A	304	319	Right-handed alpha
Helix 4	AA4	A	366	378	Right-handed alpha
Helix 5	AA5	A	383	390	Right-handed alpha
Helix 6	AA6	A	415	428	Right-handed alpha
Helix 7	AA7	A	431	435	Right-handed 310
Helix 8	AA8	A	462	467	Right-handed alpha
Helix 9	AA9	A	549	558	Right-handed alpha
Helix 10	AB1	A	566	575	Right-handed alpha
Helix 11	AB2	A	672	675	Right-handed 310
Helix 12	AB3	B	131	135	Right-handed 310
Helix 13	AB4	B	178	191	Right-handed alpha
Helix 14	AB5	B	216	220	Right-handed 310
Helix 15	AB6	C	248	255	Right-handed alpha
Helix 16	AB7	C	258	279	Right-handed alpha
Helix 17	AB8	C	304	319	Right-handed alpha
Helix 18	AB9	C	362	378	Right-handed alpha
Helix 19	AC1	C	383	390	Right-handed alpha
Helix 20	AC2	C	415	429	Right-handed alpha
Helix 21	AC3	C	431	435	Right-handed 310
Helix 22	AC4	C	462	467	Right-handed alpha
Helix 23	AC5	C	549	558	Right-handed alpha
Helix 24	AC6	C	566	574	Right-handed alpha
Helix 25	AC7	C	670	675	Right-handed alpha
Helix 26	AC8	D	158	162	Right-handed 310
Helix 27	AC9	D	181	189	Right-handed alpha
Helix 28	AD1	D	210	214	Right-handed 310
Helix 29	AD2	E	248	255	Right-handed alpha
Helix 30	AD3	E	258	278	Right-handed alpha
Helix 31	AD4	E	304	320	Right-handed alpha
Helix 32	AD5	E	362	378	Right-handed alpha
Helix 33	AD6	E	383	389	Right-handed alpha
Helix 34	AD7	E	415	429	Right-handed alpha
Helix 35	AD8	E	462	467	Right-handed alpha
Helix 36	AD9	E	549	558	Right-handed alpha
Helix 37	AE1	E	566	574	Right-handed alpha
Helix 38	AE2	E	672	675	Right-handed 310
Helix 39	AE3	F	86	90	Right-handed 310
Helix 40	AE4	F	178	180	Right-handed 310
Helix 41	AE5	F	181	191	Right-handed alpha
Helix 42	AE6	F	215	219	Right-handed 310

There are 57 sheets in PDB entry 9KZT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	292	first strand
Strand 2	A	240	247	parallel
Strand 3	A	326	331	parallel
Strand 4	A	356	359	parallel
Strand 5	A	342	343	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	491	492	first strand
Strand 2	A	495	496	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	502	504	first strand
Strand 2	A	514	515	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	511	512	first strand
Strand 2	A	527	528	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	541	543	first strand
Strand 2	A	546	548	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	563	564	first strand
Strand 2	A	605	606	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	622	624	first strand
Strand 2	A	635	637	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	661	663	first strand
Strand 2	A	668	670	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	693	694	first strand
Strand 2	A	700	701	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	55	first strand
Strand 2	B	72	75	parallel
Strand 3	B	95	99	parallel
Strand 4	B	119	123	parallel
Strand 5	B	143	147	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	82	first strand
Strand 2	B	105	106	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	201	first strand
Strand 2	B	207	210	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	227	230	first strand
Strand 2	B	547	549	anti-parallel
Strand 3	B	533	536	anti-parallel
Strand 4	B	527	530	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	244	first strand
Strand 2	B	247	250	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	253	254	first strand
Strand 2	B	259	266	anti-parallel
Strand 3	B	271	278	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	283	291	first strand
Strand 2	B	294	301	anti-parallel
Strand 3	B	307	311	anti-parallel
Strand 4	B	318	323	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	334	340	first strand
Strand 2	B	343	349	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	360	362	first strand
Strand 2	B	367	369	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	381	383	first strand
Strand 2	B	395	402	anti-parallel
Strand 3	B	386	388	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	381	383	first strand
Strand 2	B	395	402	anti-parallel
Strand 3	B	409	413	anti-parallel
Strand 4	B	420	421	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	436	438	first strand
Strand 2	B	445	447	anti-parallel
Strand 3	B	452	460	anti-parallel
Strand 4	B	465	474	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	479	484	first strand
Strand 2	B	487	492	anti-parallel
Strand 3	B	499	505	anti-parallel
Strand 4	B	510	517	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	283	292	first strand
Strand 2	C	239	247	parallel
Strand 3	C	326	331	parallel
Strand 4	C	355	359	parallel
Strand 5	C	341	343	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	474	475	first strand
Strand 2	C	478	479	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	491	492	first strand
Strand 2	C	495	496	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	502	504	first strand
Strand 2	C	514	515	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	541	543	first strand
Strand 2	C	546	548	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	563	564	first strand
Strand 2	C	604	606	anti-parallel
Strand 3	C	635	637	anti-parallel
Strand 4	C	622	624	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	656	658	first strand
Strand 2	C	661	663	anti-parallel
Strand 3	C	668	669	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	693	694	first strand
Strand 2	C	700	701	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	48	first strand
Strand 2	D	52	56	anti-parallel
Strand 3	D	71	75	parallel
Strand 4	D	95	96	parallel
Strand 5	D	119	120	parallel
Strand 6	D	143	145	parallel
Strand 7	D	167	169	parallel
Strand 8	D	194	196	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	105	106	first strand
Strand 2	D	129	130	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	226	228	first strand
Strand 2	D	546	550	anti-parallel
Strand 3	D	533	538	anti-parallel
Strand 4	D	525	530	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	239	242	first strand
Strand 2	D	249	253	anti-parallel
Strand 3	D	259	266	anti-parallel
Strand 4	D	271	279	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	283	287	first strand
Strand 2	D	294	301	anti-parallel
Strand 3	D	290	291	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	283	287	first strand
Strand 2	D	294	301	anti-parallel
Strand 3	D	306	311	anti-parallel
Strand 4	D	318	322	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	332	340	first strand
Strand 2	D	343	350	anti-parallel
Strand 3	D	358	361	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	381	387	first strand
Strand 2	D	396	403	anti-parallel
Strand 3	D	406	414	anti-parallel
Strand 4	D	419	421	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	434	440	first strand
Strand 2	D	443	449	anti-parallel
Strand 3	D	455	460	anti-parallel
Strand 4	D	465	471	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	479	484	first strand
Strand 2	D	487	492	anti-parallel
Strand 3	D	499	504	anti-parallel
Strand 4	D	511	517	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	283	292	first strand
Strand 2	E	239	247	parallel
Strand 3	E	326	330	parallel
Strand 4	E	355	358	parallel
Strand 5	E	341	343	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	491	492	first strand
Strand 2	E	495	496	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	502	504	first strand
Strand 2	E	514	515	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	541	543	first strand
Strand 2	E	546	548	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	563	564	first strand
Strand 2	E	605	606	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	622	624	first strand
Strand 2	E	635	637	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	661	663	first strand
Strand 2	E	668	670	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	693	694	first strand
Strand 2	E	700	701	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	56	first strand
Strand 2	F	71	75	parallel
Strand 3	F	95	99	parallel
Strand 4	F	119	123	parallel
Strand 5	F	143	145	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	199	201	first strand
Strand 2	F	207	210	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	225	232	first strand
Strand 2	F	545	551	anti-parallel
Strand 3	F	533	538	anti-parallel
Strand 4	F	526	530	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	239	244	first strand
Strand 2	F	247	254	anti-parallel
Strand 3	F	259	265	anti-parallel
Strand 4	F	272	279	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	283	291	first strand
Strand 2	F	294	301	anti-parallel
Strand 3	F	307	312	anti-parallel
Strand 4	F	317	323	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	332	340	first strand
Strand 2	F	343	350	anti-parallel
Strand 3	F	357	362	anti-parallel
Strand 4	F	367	373	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	379	387	first strand
Strand 2	F	396	403	anti-parallel
Strand 3	F	406	414	anti-parallel
Strand 4	F	419	420	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	437	440	first strand
Strand 2	F	443	448	anti-parallel
Strand 3	F	454	460	anti-parallel
Strand 4	F	465	472	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	480	484	first strand
Strand 2	F	487	492	anti-parallel
Strand 3	F	499	505	anti-parallel
Strand 4	F	510	517	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9KZT

Analysis of interatomic Contacts of Structural Units in PDB entry:
9KZT