Analysis of interatomic Contacts of Structural Units in PDB entry:
9L08


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9L08 entry

There are 2 chains in PDB entry 9L08 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1THR 291
B
 GLY 1THR 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 9L08. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 11Right-handed alpha
Helix 2
AA2
A
12 18Right-handed 310
Helix 3
AA3
A
21 55Right-handed alpha
Helix 4
AA4
A
56 60Right-handed 310
Helix 5
AA5
A
71 79Right-handed alpha
Helix 6
AA6
A
82 91Right-handed alpha
Helix 7
AA7
A
100 108Right-handed alpha
Helix 8
AA8
A
109 115Right-handed 310
Helix 9
AA9
A
118 152Right-handed alpha
Helix 10
AB1
A
153 157Right-handed 310
Helix 11
AB2
A
168 176Right-handed alpha
Helix 12
AB3
A
179 188Right-handed alpha
Helix 13
AB4
A
197 205Right-handed alpha
Helix 14
AB5
A
206 212Right-handed 310
Helix 15
AB6
A
215 249Right-handed alpha
Helix 16
AB7
A
250 254Right-handed 310
Helix 17
AB8
A
265 273Right-handed alpha
Helix 18
AB9
A
276 285Right-handed alpha
Helix 19
AC1
B
3 11Right-handed alpha
Helix 20
AC2
B
12 18Right-handed 310
Helix 21
AC3
B
21 55Right-handed alpha
Helix 22
AC4
B
56 60Right-handed 310
Helix 23
AC5
B
71 79Right-handed alpha
Helix 24
AC6
B
82 91Right-handed alpha
Helix 25
AC7
B
100 108Right-handed alpha
Helix 26
AC8
B
109 115Right-handed 310
Helix 27
AC9
B
118 152Right-handed alpha
Helix 28
AD1
B
153 157Right-handed 310
Helix 29
AD2
B
168 176Right-handed alpha
Helix 30
AD3
B
179 188Right-handed alpha
Helix 31
AD4
B
197 205Right-handed alpha
Helix 32
AD5
B
206 212Right-handed 310
Helix 33
AD6
B
215 249Right-handed alpha
Helix 34
AD7
B
250 254Right-handed 310
Helix 35
AD8
B
265 273Right-handed alpha
Helix 36
AD9
B
276 285Right-handed alpha
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There are no sheets in PDB entry 9L08
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