Analysis of interatomic Contacts of Structural Units in PDB entry:
9L0K

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9L0K entry

There are 25 chains in PDB entry 9L0K (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 11	GLY 754
B	THR 2	GLY 733
C	SER 2	TYR 81
D	THR 4	GLY 141
E	VAL 2	VAL 61
F	ASP 28	ARG 188
I	MET 1	ASP 33
J	MET 1	MET 42
L	SER 2	LEU 152
M	MET 1	GLN 30
K	VAL 10	LEU 86
s	ALA 99	ALA 252
c	ASP 43	PHE 212
a	GLU 42	PRO 213
b	ALA 29	VAL 206
h	PHE 64	TYR 225
m	ALA 37	PHE 210
l	ASP 37	ASN 211
k	LEU 35	ALA 223
i	ASP 39	PHE 218
j	ALA 37	ASN 209
d	MET 38	SER 212
R	TYR 41	LYS 130
n	LEU 38	LEU 218
Q	ALA 89	ASN 231

There are195 helices in PDB entry 9L0K. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	27	31	Right-handed 310
Helix 2	AA2	A	38	42	Right-handed 310
Helix 3	AA3	A	46	55	Right-handed alpha
Helix 4	AA4	A	58	62	Right-handed 310
Helix 5	AA5	A	65	98	Right-handed alpha
Helix 6	AA6	A	100	107	Right-handed alpha
Helix 7	AA7	A	123	128	Right-handed 310
Helix 8	AA8	A	143	152	Right-handed alpha
Helix 9	AA9	A	155	183	Right-handed alpha
Helix 10	AB1	A	187	194	Right-handed alpha
Helix 11	AB2	A	195	206	Right-handed alpha
Helix 12	AB3	A	208	222	Right-handed alpha
Helix 13	AB4	A	222	232	Right-handed alpha
Helix 14	AB5	A	235	239	Right-handed 310
Helix 15	AB6	A	241	248	Right-handed alpha
Helix 16	AB7	A	248	256	Right-handed alpha
Helix 17	AB8	A	257	262	Right-handed 310
Helix 18	AB9	A	263	268	Right-handed alpha
Helix 19	AC1	A	270	277	Right-handed 310
Helix 20	AC2	A	292	311	Right-handed alpha
Helix 21	AC3	A	323	331	Right-handed alpha
Helix 22	AC4	A	342	350	Right-handed alpha
Helix 23	AC5	A	350	376	Right-handed alpha
Helix 24	AC6	A	385	418	Right-handed alpha
Helix 25	AC7	A	427	435	Right-handed alpha
Helix 26	AC8	A	435	467	Right-handed alpha
Helix 27	AC9	A	483	496	Right-handed alpha
Helix 28	AD1	A	509	513	Right-handed 310
Helix 29	AD2	A	531	558	Right-handed alpha
Helix 30	AD3	A	567	572	Right-handed alpha
Helix 31	AD4	A	589	620	Right-handed alpha
Helix 32	AD5	A	626	628	Right-handed 310
Helix 33	AD6	A	637	642	Right-handed alpha
Helix 34	AD7	A	644	652	Right-handed alpha
Helix 35	AD8	A	652	657	Right-handed alpha
Helix 36	AD9	A	657	662	Right-handed alpha
Helix 37	AE1	A	668	691	Right-handed alpha
Helix 38	AE2	A	692	710	Right-handed alpha
Helix 39	AE3	A	722	754	Right-handed alpha
Helix 40	AE4	B	8	13	Right-handed alpha
Helix 41	AE5	B	17	26	Right-handed alpha
Helix 42	AE6	B	29	33	Right-handed 310
Helix 43	AE7	B	37	71	Right-handed alpha
Helix 44	AE8	B	72	79	Right-handed alpha
Helix 45	AE9	B	96	103	Right-handed alpha
Helix 46	AF1	B	118	126	Right-handed alpha
Helix 47	AF2	B	131	155	Right-handed alpha
Helix 48	AF3	B	163	168	Right-handed alpha
Helix 49	AF4	B	169	180	Right-handed alpha
Helix 50	AF5	B	182	196	Right-handed alpha
Helix 51	AF6	B	196	202	Right-handed alpha
Helix 52	AF7	B	221	227	Right-handed alpha
Helix 53	AF8	B	228	234	Right-handed 310
Helix 54	AF9	B	268	287	Right-handed alpha
Helix 55	AG1	B	299	307	Right-handed alpha
Helix 56	AG2	B	320	328	Right-handed alpha
Helix 57	AG3	B	328	354	Right-handed alpha
Helix 58	AG4	B	363	396	Right-handed alpha
Helix 59	AG5	B	399	403	Right-handed 310
Helix 60	AG6	B	405	413	Right-handed alpha
Helix 61	AG7	B	413	445	Right-handed alpha
Helix 62	AG8	B	447	451	Right-handed 310
Helix 63	AG9	B	456	466	Right-handed alpha
Helix 64	AH1	B	475	479	Right-handed 310
Helix 65	AH2	B	482	489	Right-handed alpha
Helix 66	AH3	B	492	501	Right-handed alpha
Helix 67	AH4	B	512	539	Right-handed alpha
Helix 68	AH5	B	548	552	Right-handed 310
Helix 69	AH6	B	570	602	Right-handed alpha
Helix 70	AH7	B	604	612	Right-handed alpha
Helix 71	AH8	B	614	622	Right-handed alpha
Helix 72	AH9	B	624	626	Right-handed 310
Helix 73	AI1	B	627	632	Right-handed alpha
Helix 74	AI2	B	642	665	Right-handed alpha
Helix 75	AI3	B	666	684	Right-handed alpha
Helix 76	AI4	B	700	733	Right-handed alpha
Helix 77	AI5	C	15	21	Right-handed alpha
Helix 78	AI6	C	44	48	Right-handed 310
Helix 79	AI7	C	52	58	Right-handed alpha
Helix 80	AI8	D	22	28	Right-handed alpha
Helix 81	AI9	D	64	80	Right-handed alpha
Helix 82	AJ1	D	122	126	Right-handed 310
Helix 83	AJ2	D	128	133	Right-handed alpha
Helix 84	AJ3	E	54	56	Right-handed 310
Helix 85	AJ4	F	28	32	Right-handed 310
Helix 86	AJ5	F	38	57	Right-handed alpha
Helix 87	AJ6	F	63	85	Right-handed alpha
Helix 88	AJ7	F	103	107	Right-handed 310
Helix 89	AJ8	F	110	136	Right-handed alpha
Helix 90	AJ9	F	140	147	Right-handed alpha
Helix 91	AK1	F	149	160	Right-handed alpha
Helix 92	AK2	F	162	173	Right-handed alpha
Helix 93	AK3	F	179	183	Right-handed 310
Helix 94	AK4	I	4	32	Right-handed alpha
Helix 95	AK5	J	2	10	Right-handed alpha
Helix 96	AK6	J	11	34	Right-handed alpha
Helix 97	AK7	L	9	11	Right-handed 310
Helix 98	AK8	L	19	24	Right-handed alpha
Helix 99	AK9	L	24	34	Right-handed alpha
Helix 100	AL1	L	42	58	Right-handed alpha
Helix 101	AL2	L	58	66	Right-handed alpha
Helix 102	AL3	L	73	101	Right-handed alpha
Helix 103	AL4	L	112	141	Right-handed alpha
Helix 104	AL5	L	141	147	Right-handed alpha
Helix 105	AL6	L	148	152	Right-handed 310
Helix 106	AL7	M	3	29	Right-handed alpha
Helix 107	AL8	K	17	39	Right-handed alpha
Helix 108	AL9	K	58	84	Right-handed alpha
Helix 109	AM1	s	137	142	Right-handed alpha
Helix 110	AM2	s	143	163	Right-handed alpha
Helix 111	AM3	s	179	183	Right-handed 310
Helix 112	AM4	s	196	201	Right-handed alpha
Helix 113	AM5	s	203	207	Right-handed 310
Helix 114	AM6	s	241	251	Right-handed alpha
Helix 115	AM7	c	71	76	Right-handed alpha
Helix 116	AM8	c	77	105	Right-handed alpha
Helix 117	AM9	c	114	126	Right-handed alpha
Helix 118	AN1	c	126	151	Right-handed alpha
Helix 119	AN2	c	169	202	Right-handed alpha
Helix 120	AN3	c	204	211	Right-handed alpha
Helix 121	AN4	a	70	74	Right-handed 310
Helix 122	AN5	a	76	104	Right-handed alpha
Helix 123	AN6	a	106	110	Right-handed 310
Helix 124	AN7	a	115	123	Right-handed alpha
Helix 125	AN8	a	124	149	Right-handed alpha
Helix 126	AN9	a	166	199	Right-handed alpha
Helix 127	AO1	a	201	208	Right-handed alpha
Helix 128	AO2	b	57	62	Right-handed alpha
Helix 129	AO3	b	63	90	Right-handed alpha
Helix 130	AO4	b	95	99	Right-handed 310
Helix 131	AO5	b	102	110	Right-handed alpha
Helix 132	AO6	b	111	130	Right-handed alpha
Helix 133	AO7	b	163	193	Right-handed alpha
Helix 134	AO8	b	195	202	Right-handed alpha
Helix 135	AO9	h	64	68	Right-handed 310
Helix 136	AP1	h	72	99	Right-handed alpha
Helix 137	AP2	h	110	115	Right-handed alpha
Helix 138	AP3	h	116	119	Right-handed 310
Helix 139	AP4	h	129	152	Right-handed alpha
Helix 140	AP5	h	183	207	Right-handed alpha
Helix 141	AP6	h	211	220	Right-handed alpha
Helix 142	AP7	m	65	69	Right-handed 310
Helix 143	AP8	m	71	99	Right-handed alpha
Helix 144	AP9	m	103	109	Right-handed alpha
Helix 145	AQ1	m	112	114	Right-handed 310
Helix 146	AQ2	m	115	123	Right-handed alpha
Helix 147	AQ3	m	124	150	Right-handed alpha
Helix 148	AQ4	m	167	200	Right-handed alpha
Helix 149	AQ5	m	204	209	Right-handed alpha
Helix 150	AQ6	l	63	67	Right-handed 310
Helix 151	AQ7	l	69	94	Right-handed alpha
Helix 152	AQ8	l	109	115	Right-handed 310
Helix 153	AQ9	l	116	135	Right-handed alpha
Helix 154	AR1	l	164	197	Right-handed alpha
Helix 155	AR2	l	199	205	Right-handed alpha
Helix 156	AR3	k	72	76	Right-handed 310
Helix 157	AR4	k	78	106	Right-handed alpha
Helix 158	AR5	k	110	115	Right-handed alpha
Helix 159	AR6	k	120	134	Right-handed alpha
Helix 160	AR7	k	139	163	Right-handed alpha
Helix 161	AR8	k	184	215	Right-handed alpha
Helix 162	AR9	k	217	223	Right-handed alpha
Helix 163	AS1	i	67	72	Right-handed alpha
Helix 164	AS2	i	73	101	Right-handed alpha
Helix 165	AS3	i	112	120	Right-handed alpha
Helix 166	AS4	i	121	140	Right-handed alpha
Helix 167	AS5	i	169	202	Right-handed alpha
Helix 168	AS6	i	204	211	Right-handed alpha
Helix 169	AS7	j	65	70	Right-handed alpha
Helix 170	AS8	j	71	99	Right-handed alpha
Helix 171	AS9	j	103	109	Right-handed alpha
Helix 172	AT1	j	114	123	Right-handed alpha
Helix 173	AT2	j	124	148	Right-handed alpha
Helix 174	AT3	j	167	200	Right-handed alpha
Helix 175	AT4	j	202	208	Right-handed alpha
Helix 176	AT5	d	73	101	Right-handed alpha
Helix 177	AT6	d	117	126	Right-handed alpha
Helix 178	AT7	d	127	152	Right-handed alpha
Helix 179	AT8	d	172	203	Right-handed alpha
Helix 180	AT9	d	205	212	Right-handed alpha
Helix 181	AU1	R	61	69	Right-handed 310
Helix 182	AU2	R	72	95	Right-handed alpha
Helix 183	AU3	R	102	109	Right-handed alpha
Helix 184	AU4	R	110	127	Right-handed alpha
Helix 185	AU5	n	75	79	Right-handed 310
Helix 186	AU6	n	81	109	Right-handed alpha
Helix 187	AU7	n	124	135	Right-handed alpha
Helix 188	AU8	n	136	152	Right-handed alpha
Helix 189	AU9	n	152	163	Right-handed alpha
Helix 190	AV1	n	188	214	Right-handed alpha
Helix 191	AV2	Q	91	123	Right-handed alpha
Helix 192	AV3	Q	130	158	Right-handed alpha
Helix 193	AV4	Q	180	185	Right-handed 310
Helix 194	AV5	Q	186	207	Right-handed alpha
Helix 195	AV6	Q	208	231	Right-handed alpha

There are 15 sheets in PDB entry 9L0K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	19	first strand
Strand 2	A	184	186	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	116	first strand
Strand 2	A	136	139	anti-parallel
Strand 3	A	129	130	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	517	519	first strand
Strand 2	A	522	525	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	622	624	first strand
Strand 2	A	630	632	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	86	89	first strand
Strand 2	B	112	114	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	634	635	first strand
Strand 2	B	638	639	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	68	first strand
Strand 2	C	4	8	anti-parallel
Strand 3	D	118	119	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	38	41	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	62	first strand
Strand 2	D	30	37	anti-parallel
Strand 3	D	85	89	anti-parallel
Strand 4	D	95	99	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	44	first strand
Strand 2	D	50	53	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	50	53	first strand
Strand 2	E	36	39	anti-parallel
Strand 3	E	21	27	anti-parallel
Strand 4	E	7	10	anti-parallel
Strand 5	E	58	60	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	33	34	first strand
Strand 2	F	89	90	anti-parallel
Strand 3	F	96	97	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	6	7	first strand
Strand 2	L	17	18	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	s	166	169	first strand
Strand 2	s	175	178	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	s	222	223	first strand
Strand 2	b	91	92	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9L0K

Analysis of interatomic Contacts of Structural Units in PDB entry:
9L0K