Analysis of interatomic Contacts of Structural Units in PDB entry:
9L0N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9L0N entry

There are 4 chains in PDB entry 9L0N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	HIS 455
B	MET 1	LEU 453
C	MET 1	GLU 454
D	MET 1	LEU 453

There are 84 helices in PDB entry 9L0N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	19	Right-handed alpha
Helix 2	AA2	A	30	37	Right-handed alpha
Helix 3	AA3	A	42	46	Right-handed 310
Helix 4	AA4	A	53	68	Right-handed alpha
Helix 5	AA5	A	78	83	Right-handed alpha
Helix 6	AA6	A	91	108	Right-handed alpha
Helix 7	AA7	A	122	127	Right-handed alpha
Helix 8	AA8	A	128	134	Right-handed 310
Helix 9	AA9	A	135	152	Right-handed alpha
Helix 10	AB1	A	153	155	Right-handed 310
Helix 11	AB2	A	163	173	Right-handed alpha
Helix 12	AB3	A	184	210	Right-handed alpha
Helix 13	AB4	A	230	242	Right-handed alpha
Helix 14	AB5	A	255	264	Right-handed alpha
Helix 15	AB6	A	268	275	Right-handed alpha
Helix 16	AB7	A	276	279	Right-handed 310
Helix 17	AB8	A	283	291	Right-handed alpha
Helix 18	AB9	A	336	350	Right-handed alpha
Helix 19	AC1	A	374	394	Right-handed alpha
Helix 20	AC2	A	411	415	Right-handed 310
Helix 21	AC3	A	435	448	Right-handed alpha
Helix 22	AC4	B	14	19	Right-handed alpha
Helix 23	AC5	B	30	37	Right-handed alpha
Helix 24	AC6	B	42	46	Right-handed 310
Helix 25	AC7	B	53	68	Right-handed alpha
Helix 26	AC8	B	78	83	Right-handed alpha
Helix 27	AC9	B	91	108	Right-handed alpha
Helix 28	AD1	B	122	127	Right-handed alpha
Helix 29	AD2	B	128	134	Right-handed 310
Helix 30	AD3	B	135	152	Right-handed alpha
Helix 31	AD4	B	153	155	Right-handed 310
Helix 32	AD5	B	163	173	Right-handed alpha
Helix 33	AD6	B	184	210	Right-handed alpha
Helix 34	AD7	B	230	242	Right-handed alpha
Helix 35	AD8	B	255	265	Right-handed alpha
Helix 36	AD9	B	268	275	Right-handed alpha
Helix 37	AE1	B	276	279	Right-handed 310
Helix 38	AE2	B	283	291	Right-handed alpha
Helix 39	AE3	B	336	350	Right-handed alpha
Helix 40	AE4	B	374	394	Right-handed alpha
Helix 41	AE5	B	411	415	Right-handed 310
Helix 42	AE6	B	435	448	Right-handed alpha
Helix 43	AE7	C	14	19	Right-handed alpha
Helix 44	AE8	C	30	37	Right-handed alpha
Helix 45	AE9	C	42	46	Right-handed 310
Helix 46	AF1	C	53	68	Right-handed alpha
Helix 47	AF2	C	78	83	Right-handed alpha
Helix 48	AF3	C	91	108	Right-handed alpha
Helix 49	AF4	C	122	127	Right-handed alpha
Helix 50	AF5	C	128	134	Right-handed 310
Helix 51	AF6	C	135	152	Right-handed alpha
Helix 52	AF7	C	153	155	Right-handed 310
Helix 53	AF8	C	163	173	Right-handed alpha
Helix 54	AF9	C	184	210	Right-handed alpha
Helix 55	AG1	C	230	242	Right-handed alpha
Helix 56	AG2	C	255	264	Right-handed alpha
Helix 57	AG3	C	268	275	Right-handed alpha
Helix 58	AG4	C	276	279	Right-handed 310
Helix 59	AG5	C	283	291	Right-handed alpha
Helix 60	AG6	C	336	350	Right-handed alpha
Helix 61	AG7	C	374	394	Right-handed alpha
Helix 62	AG8	C	411	415	Right-handed 310
Helix 63	AG9	C	435	448	Right-handed alpha
Helix 64	AH1	D	14	19	Right-handed alpha
Helix 65	AH2	D	30	37	Right-handed alpha
Helix 66	AH3	D	42	46	Right-handed 310
Helix 67	AH4	D	53	68	Right-handed alpha
Helix 68	AH5	D	78	83	Right-handed alpha
Helix 69	AH6	D	91	108	Right-handed alpha
Helix 70	AH7	D	122	127	Right-handed alpha
Helix 71	AH8	D	128	134	Right-handed 310
Helix 72	AH9	D	135	152	Right-handed alpha
Helix 73	AI1	D	153	155	Right-handed 310
Helix 74	AI2	D	163	173	Right-handed alpha
Helix 75	AI3	D	184	210	Right-handed alpha
Helix 76	AI4	D	230	242	Right-handed alpha
Helix 77	AI5	D	254	265	Right-handed alpha
Helix 78	AI6	D	268	275	Right-handed alpha
Helix 79	AI7	D	276	279	Right-handed 310
Helix 80	AI8	D	283	291	Right-handed alpha
Helix 81	AI9	D	336	350	Right-handed alpha
Helix 82	AJ1	D	374	394	Right-handed alpha
Helix 83	AJ2	D	411	415	Right-handed 310
Helix 84	AJ3	D	435	448	Right-handed alpha

There are 12 sheets in PDB entry 9L0N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	214	218	first strand
Strand 2	A	157	162	parallel
Strand 3	A	111	117	parallel
Strand 4	A	72	76	parallel
Strand 5	A	8	12	parallel
Strand 6	A	398	404	parallel
Strand 7	A	353	357	parallel
Strand 8	A	297	300	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	226	first strand
Strand 2	A	304	309	parallel
Strand 3	A	315	316	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	423	425	first strand
Strand 2	A	432	434	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	214	218	first strand
Strand 2	B	157	162	parallel
Strand 3	B	111	117	parallel
Strand 4	B	72	76	parallel
Strand 5	B	8	12	parallel
Strand 6	B	398	404	parallel
Strand 7	B	353	357	parallel
Strand 8	B	297	300	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	223	226	first strand
Strand 2	B	304	309	parallel
Strand 3	B	315	316	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	423	425	first strand
Strand 2	B	432	434	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	214	218	first strand
Strand 2	C	157	162	parallel
Strand 3	C	111	117	parallel
Strand 4	C	72	76	parallel
Strand 5	C	8	12	parallel
Strand 6	C	398	404	parallel
Strand 7	C	353	357	parallel
Strand 8	C	297	300	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	223	226	first strand
Strand 2	C	304	309	parallel
Strand 3	C	315	316	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	423	425	first strand
Strand 2	C	432	434	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	214	218	first strand
Strand 2	D	157	162	parallel
Strand 3	D	111	117	parallel
Strand 4	D	72	76	parallel
Strand 5	D	8	12	parallel
Strand 6	D	398	404	parallel
Strand 7	D	353	357	parallel
Strand 8	D	297	300	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	223	226	first strand
Strand 2	D	304	309	parallel
Strand 3	D	315	316	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	423	425	first strand
Strand 2	D	432	434	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9L0N

Analysis of interatomic Contacts of Structural Units in PDB entry:
9L0N