Analysis of interatomic Contacts of Structural Units in PDB entry:
9L0W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9L0W entry

There are 4 chains in PDB entry 9L0W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3071TYR 4118
B
 LYS 215MET 698
C
 LYS 215MET 698
D
 LYS 215LYS 695
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 9L0W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3074 3106Right-handed alpha
Helix 2
AA2
A
3247 3257Right-handed alpha
Helix 3
AA3
A
3262 3266Right-handed 310
Helix 4
AA4
A
3278 3299Right-handed alpha
Helix 5
AA5
A
3322 3334Right-handed alpha
Helix 6
AA6
A
3337 3345Right-handed alpha
Helix 7
AA7
A
3553 3577Right-handed alpha
Helix 8
AA8
A
3578 3580Right-handed 310
Helix 9
AA9
A
3581 3599Right-handed alpha
Helix 10
AB1
A
3602 3618Right-handed alpha
Helix 11
AB2
A
3656 3690Right-handed alpha
Helix 12
AB3
A
3694 3709Right-handed alpha
Helix 13
AB4
A
3710 3717Right-handed alpha
Helix 14
AB5
A
3722 3730Right-handed alpha
Helix 15
AB6
A
3731 3736Right-handed alpha
Helix 16
AB7
A
3826 3839Right-handed alpha
Helix 17
AB8
A
3892 3896Right-handed 310
Helix 18
AB9
A
3898 3904Right-handed alpha
Helix 19
AC1
A
3905 3926Right-handed alpha
Helix 20
AC2
A
3932 3969Right-handed alpha
Helix 21
AC3
A
3977 4005Right-handed alpha
Helix 22
AC4
A
4006 4009Right-handed 310
Helix 23
AC5
A
4013 4037Right-handed alpha
Helix 24
AC6
A
4101 4118Right-handed alpha
Helix 25
AC7
B
217 241Right-handed alpha
Helix 26
AC8
B
244 259Right-handed alpha
Helix 27
AC9
B
269 273Right-handed 310
Helix 28
AD1
B
275 284Right-handed alpha
Helix 29
AD2
B
285 292Right-handed alpha
Helix 30
AD3
B
349 353Right-handed 310
Helix 31
AD4
B
363 367Right-handed 310
Helix 32
AD5
B
370 375Right-handed alpha
Helix 33
AD6
B
398 412Right-handed alpha
Helix 34
AD7
B
467 495Right-handed alpha
Helix 35
AD8
B
508 531Right-handed alpha
Helix 36
AD9
B
532 541Right-handed alpha
Helix 37
AE1
B
548 572Right-handed alpha
Helix 38
AE2
B
573 576Right-handed 310
Helix 39
AE3
B
580 593Right-handed alpha
Helix 40
AE4
B
593 620Right-handed alpha
Helix 41
AE5
B
628 641Right-handed alpha
Helix 42
AE6
B
655 670Right-handed alpha
Helix 43
AE7
B
673 698Right-handed alpha
Helix 44
AE8
C
216 241Right-handed alpha
Helix 45
AE9
C
244 259Right-handed alpha
Helix 46
AF1
C
269 273Right-handed 310
Helix 47
AF2
C
275 285Right-handed alpha
Helix 48
AF3
C
285 292Right-handed alpha
Helix 49
AF4
C
349 353Right-handed 310
Helix 50
AF5
C
362 366Right-handed 310
Helix 51
AF6
C
398 412Right-handed alpha
Helix 52
AF7
C
468 496Right-handed alpha
Helix 53
AF8
C
510 531Right-handed alpha
Helix 54
AF9
C
532 537Right-handed alpha
Helix 55
AG1
C
548 572Right-handed alpha
Helix 56
AG2
C
573 578Right-handed alpha
Helix 57
AG3
C
580 593Right-handed alpha
Helix 58
AG4
C
593 619Right-handed alpha
Helix 59
AG5
C
628 642Right-handed alpha
Helix 60
AG6
C
648 653Right-handed alpha
Helix 61
AG7
C
656 671Right-handed alpha
Helix 62
AG8
C
671 698Right-handed alpha
Helix 63
AG9
D
217 240Right-handed alpha
Helix 64
AH1
D
245 256Right-handed alpha
Helix 65
AH2
D
275 284Right-handed alpha
Helix 66
AH3
D
349 353Right-handed 310
Helix 67
AH4
D
398 412Right-handed alpha
Helix 68
AH5
D
467 494Right-handed alpha
Helix 69
AH6
D
507 536Right-handed alpha
Helix 70
AH7
D
553 577Right-handed alpha
Helix 71
AH8
D
578 580Right-handed 310
Helix 72
AH9
D
597 619Right-handed alpha
Helix 73
AI1
D
628 642Right-handed alpha
Helix 74
AI2
D
648 653Right-handed alpha
Helix 75
AI3
D
656 670Right-handed alpha
Helix 76
AI4
D
671 695Right-handed alpha
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There are 6 sheets in PDB entry 9L0W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3137 3140first strand
Strand 2
A
3183 3187anti-parallel
Strand 3
A
3223 3226anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3196 3197first strand
Strand 2
A
3217 3218anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3748 3749first strand
Strand 2
A
3852 3855anti-parallel
Strand 3
A
3864 3875anti-parallel
Strand 4
A
3878 3888anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
391 394first strand
Strand 2
B
320 325anti-parallel
Strand 3
B
419 428anti-parallel
Strand 4
B
437 444anti-parallel
Strand 5
B
452 458anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
391 394first strand
Strand 2
C
315 325anti-parallel
Strand 3
C
419 428anti-parallel
Strand 4
C
436 444anti-parallel
Strand 5
C
452 460anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
391 394first strand
Strand 2
D
320 325anti-parallel
Strand 3
D
419 428anti-parallel
Strand 4
D
437 444anti-parallel
Strand 5
D
452 458anti-parallel
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