Analysis of interatomic Contacts of Structural Units in PDB entry:
9L43


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9L43 entry

There are 4 chains in PDB entry 9L43 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 8LEU 949
B
 SER 10SER 944
D
 GLY 309LEU 776
C
 GLN 308ALA 778
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are131 helices in PDB entry 9L43. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 19Right-handed alpha
Helix 2
AA2
A
27 46Right-handed alpha
Helix 3
AA3
A
48 55Right-handed alpha
Helix 4
AA4
A
63 79Right-handed alpha
Helix 5
AA5
A
90 112Right-handed alpha
Helix 6
AA6
A
113 115Right-handed 310
Helix 7
AA7
A
116 137Right-handed alpha
Helix 8
AA8
A
138 165Right-handed alpha
Helix 9
AA9
A
181 185Right-handed 310
Helix 10
AB1
A
198 221Right-handed alpha
Helix 11
AB2
A
225 239Right-handed alpha
Helix 12
AB3
A
241 260Right-handed alpha
Helix 13
AB4
A
262 280Right-handed alpha
Helix 14
AB5
A
281 283Right-handed 310
Helix 15
AB6
A
284 303Right-handed alpha
Helix 16
AB7
A
314 331Right-handed alpha
Helix 17
AB8
A
332 337Right-handed alpha
Helix 18
AB9
A
339 355Right-handed alpha
Helix 19
AC1
A
364 381Right-handed alpha
Helix 20
AC2
A
389 391Right-handed 310
Helix 21
AC3
A
392 412Right-handed alpha
Helix 22
AC4
A
460 481Right-handed alpha
Helix 23
AC5
A
488 506Right-handed alpha
Helix 24
AC6
A
507 509Right-handed 310
Helix 25
AC7
A
536 554Right-handed alpha
Helix 26
AC8
A
555 580Right-handed alpha
Helix 27
AC9
A
583 596Right-handed alpha
Helix 28
AD1
A
605 611Right-handed alpha
Helix 29
AD2
A
617 625Right-handed alpha
Helix 30
AD3
A
626 628Right-handed 310
Helix 31
AD4
A
629 643Right-handed alpha
Helix 32
AD5
A
648 661Right-handed alpha
Helix 33
AD6
A
664 683Right-handed alpha
Helix 34
AD7
A
689 695Right-handed alpha
Helix 35
AD8
A
701 718Right-handed alpha
Helix 36
AD9
A
779 784Right-handed alpha
Helix 37
AE1
A
785 792Right-handed alpha
Helix 38
AE2
A
800 815Right-handed alpha
Helix 39
AE3
A
818 823Right-handed alpha
Helix 40
AE4
A
827 835Right-handed alpha
Helix 41
AE5
A
840 861Right-handed alpha
Helix 42
AE6
A
862 880Right-handed alpha
Helix 43
AE7
A
883 897Right-handed alpha
Helix 44
AE8
A
900 918Right-handed alpha
Helix 45
AE9
A
921 949Right-handed alpha
Helix 46
AF1
B
11 17Right-handed alpha
Helix 47
AF2
B
25 45Right-handed alpha
Helix 48
AF3
B
47 51Right-handed 310
Helix 49
AF4
B
65 79Right-handed alpha
Helix 50
AF5
B
80 83Right-handed 310
Helix 51
AF6
B
94 109Right-handed alpha
Helix 52
AF7
B
116 138Right-handed alpha
Helix 53
AF8
B
138 165Right-handed alpha
Helix 54
AF9
B
198 221Right-handed alpha
Helix 55
AG1
B
222 239Right-handed alpha
Helix 56
AG2
B
241 260Right-handed alpha
Helix 57
AG3
B
262 281Right-handed alpha
Helix 58
AG4
B
284 303Right-handed alpha
Helix 59
AG5
B
314 331Right-handed alpha
Helix 60
AG6
B
332 337Right-handed alpha
Helix 61
AG7
B
339 356Right-handed alpha
Helix 62
AG8
B
364 383Right-handed alpha
Helix 63
AG9
B
384 386Right-handed 310
Helix 64
AH1
B
389 391Right-handed 310
Helix 65
AH2
B
392 411Right-handed alpha
Helix 66
AH3
B
412 414Right-handed 310
Helix 67
AH4
B
460 480Right-handed alpha
Helix 68
AH5
B
485 507Right-handed alpha
Helix 69
AH6
B
536 553Right-handed alpha
Helix 70
AH7
B
558 580Right-handed alpha
Helix 71
AH8
B
583 596Right-handed alpha
Helix 72
AH9
B
596 601Right-handed alpha
Helix 73
AI1
B
605 611Right-handed alpha
Helix 74
AI2
B
612 625Right-handed alpha
Helix 75
AI3
B
626 628Right-handed 310
Helix 76
AI4
B
629 643Right-handed alpha
Helix 77
AI5
B
648 661Right-handed alpha
Helix 78
AI6
B
664 683Right-handed alpha
Helix 79
AI7
B
689 698Right-handed alpha
Helix 80
AI8
B
700 718Right-handed alpha
Helix 81
AI9
B
762 768Right-handed alpha
Helix 82
AJ1
B
775 793Right-handed alpha
Helix 83
AJ2
B
798 811Right-handed alpha
Helix 84
AJ3
B
818 835Right-handed alpha
Helix 85
AJ4
B
839 861Right-handed alpha
Helix 86
AJ5
B
862 880Right-handed alpha
Helix 87
AJ6
B
883 896Right-handed alpha
Helix 88
AJ7
B
903 911Right-handed alpha
Helix 89
AJ8
B
922 942Right-handed alpha
Helix 90
AJ9
D
311 318Right-handed alpha
Helix 91
AK1
D
329 334Right-handed alpha
Helix 92
AK2
D
374 392Right-handed alpha
Helix 93
AK3
D
413 418Right-handed 310
Helix 94
AK4
D
419 434Right-handed alpha
Helix 95
AK5
D
468 489Right-handed alpha
Helix 96
AK6
D
490 498Right-handed alpha
Helix 97
AK7
D
536 552Right-handed alpha
Helix 98
AK8
D
554 557Right-handed 310
Helix 99
AK9
D
558 575Right-handed alpha
Helix 100
AL1
D
579 588Right-handed 310
Helix 101
AL2
D
589 595Right-handed alpha
Helix 102
AL3
D
599 615Right-handed alpha
Helix 103
AL4
D
616 623Right-handed 310
Helix 104
AL5
D
633 641Right-handed alpha
Helix 105
AL6
D
648 670Right-handed alpha
Helix 106
AL7
D
682 705Right-handed alpha
Helix 107
AL8
D
710 733Right-handed alpha
Helix 108
AL9
D
736 742Right-handed alpha
Helix 109
AM1
D
744 762Right-handed alpha
Helix 110
AM2
D
766 776Right-handed alpha
Helix 111
AM3
C
310 317Right-handed alpha
Helix 112
AM4
C
328 334Right-handed alpha
Helix 113
AM5
C
371 390Right-handed alpha
Helix 114
AM6
C
413 418Right-handed 310
Helix 115
AM7
C
419 440Right-handed alpha
Helix 116
AM8
C
465 489Right-handed alpha
Helix 117
AM9
C
490 498Right-handed alpha
Helix 118
AN1
C
536 551Right-handed alpha
Helix 119
AN2
C
556 574Right-handed alpha
Helix 120
AN3
C
579 588Right-handed 310
Helix 121
AN4
C
589 594Right-handed alpha
Helix 122
AN5
C
599 614Right-handed alpha
Helix 123
AN6
C
616 620Right-handed 310
Helix 124
AN7
C
631 641Right-handed alpha
Helix 125
AN8
C
648 668Right-handed alpha
Helix 126
AN9
C
680 702Right-handed alpha
Helix 127
AO1
C
703 705Right-handed 310
Helix 128
AO2
C
710 734Right-handed alpha
Helix 129
AO3
C
736 742Right-handed alpha
Helix 130
AO4
C
744 762Right-handed alpha
Helix 131
AO5
C
766 777Right-handed alpha
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There are 2 sheets in PDB entry 9L43. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 455first strand
Strand 2
A
532 533parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
452 453first strand
Strand 2
B
530 531parallel
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