Analysis of interatomic Contacts of Structural Units in PDB entry:
9L4C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9L4C entry

There are 4 chains in PDB entry 9L4C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 8LEU 949
B
 SER 10ALA 948
D
 TRP 301GLY 791
C
 TRP 301ALA 778
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are120 helices in PDB entry 9L4C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 20Right-handed alpha
Helix 2
AA2
A
22 46Right-handed alpha
Helix 3
AA3
A
47 55Right-handed alpha
Helix 4
AA4
A
63 79Right-handed alpha
Helix 5
AA5
A
79 84Right-handed alpha
Helix 6
AA6
A
90 113Right-handed alpha
Helix 7
AA7
A
115 138Right-handed alpha
Helix 8
AA8
A
138 166Right-handed alpha
Helix 9
AA9
A
198 216Right-handed alpha
Helix 10
AB1
A
225 239Right-handed alpha
Helix 11
AB2
A
241 260Right-handed alpha
Helix 12
AB3
A
262 283Right-handed alpha
Helix 13
AB4
A
284 303Right-handed alpha
Helix 14
AB5
A
308 313Right-handed alpha
Helix 15
AB6
A
314 332Right-handed alpha
Helix 16
AB7
A
332 337Right-handed alpha
Helix 17
AB8
A
339 356Right-handed alpha
Helix 18
AB9
A
364 385Right-handed alpha
Helix 19
AC1
A
389 412Right-handed alpha
Helix 20
AC2
A
460 480Right-handed alpha
Helix 21
AC3
A
485 506Right-handed alpha
Helix 22
AC4
A
507 509Right-handed 310
Helix 23
AC5
A
536 554Right-handed alpha
Helix 24
AC6
A
555 580Right-handed alpha
Helix 25
AC7
A
584 603Right-handed alpha
Helix 26
AC8
A
605 611Right-handed alpha
Helix 27
AC9
A
611 617Right-handed alpha
Helix 28
AD1
A
617 628Right-handed alpha
Helix 29
AD2
A
629 643Right-handed alpha
Helix 30
AD3
A
648 662Right-handed alpha
Helix 31
AD4
A
664 673Right-handed alpha
Helix 32
AD5
A
674 683Right-handed alpha
Helix 33
AD6
A
689 698Right-handed alpha
Helix 34
AD7
A
699 720Right-handed alpha
Helix 35
AD8
A
779 790Right-handed alpha
Helix 36
AD9
A
801 814Right-handed alpha
Helix 37
AE1
A
826 835Right-handed alpha
Helix 38
AE2
A
839 861Right-handed alpha
Helix 39
AE3
A
862 880Right-handed alpha
Helix 40
AE4
A
883 897Right-handed alpha
Helix 41
AE5
A
900 919Right-handed alpha
Helix 42
AE6
A
921 928Right-handed alpha
Helix 43
AE7
A
929 947Right-handed alpha
Helix 44
AE8
B
11 21Right-handed alpha
Helix 45
AE9
B
25 45Right-handed alpha
Helix 46
AF1
B
65 79Right-handed alpha
Helix 47
AF2
B
79 84Right-handed alpha
Helix 48
AF3
B
91 113Right-handed alpha
Helix 49
AF4
B
116 138Right-handed alpha
Helix 50
AF5
B
138 166Right-handed alpha
Helix 51
AF6
B
198 221Right-handed alpha
Helix 52
AF7
B
224 239Right-handed alpha
Helix 53
AF8
B
241 258Right-handed alpha
Helix 54
AF9
B
262 282Right-handed alpha
Helix 55
AG1
B
284 303Right-handed alpha
Helix 56
AG2
B
308 313Right-handed alpha
Helix 57
AG3
B
314 332Right-handed alpha
Helix 58
AG4
B
332 337Right-handed alpha
Helix 59
AG5
B
339 355Right-handed alpha
Helix 60
AG6
B
364 385Right-handed alpha
Helix 61
AG7
B
388 413Right-handed alpha
Helix 62
AG8
B
455 460Right-handed alpha
Helix 63
AG9
B
460 480Right-handed alpha
Helix 64
AH1
B
486 507Right-handed alpha
Helix 65
AH2
B
536 552Right-handed alpha
Helix 66
AH3
B
558 580Right-handed alpha
Helix 67
AH4
B
583 603Right-handed alpha
Helix 68
AH5
B
605 611Right-handed alpha
Helix 69
AH6
B
611 628Right-handed alpha
Helix 70
AH7
B
629 643Right-handed alpha
Helix 71
AH8
B
648 662Right-handed alpha
Helix 72
AH9
B
664 683Right-handed alpha
Helix 73
AI1
B
689 698Right-handed alpha
Helix 74
AI2
B
700 718Right-handed alpha
Helix 75
AI3
B
751 755Right-handed 310
Helix 76
AI4
B
759 770Right-handed alpha
Helix 77
AI5
B
775 792Right-handed alpha
Helix 78
AI6
B
798 815Right-handed alpha
Helix 79
AI7
B
817 835Right-handed alpha
Helix 80
AI8
B
839 861Right-handed alpha
Helix 81
AI9
B
862 880Right-handed alpha
Helix 82
AJ1
B
883 899Right-handed alpha
Helix 83
AJ2
B
905 915Right-handed alpha
Helix 84
AJ3
B
929 948Right-handed alpha
Helix 85
AJ4
D
305 310Right-handed alpha
Helix 86
AJ5
D
312 317Right-handed alpha
Helix 87
AJ6
D
328 334Right-handed alpha
Helix 88
AJ7
D
374 392Right-handed alpha
Helix 89
AJ8
D
413 436Right-handed alpha
Helix 90
AJ9
D
468 487Right-handed alpha
Helix 91
AK1
D
489 499Right-handed alpha
Helix 92
AK2
D
536 551Right-handed alpha
Helix 93
AK3
D
553 575Right-handed alpha
Helix 94
AK4
D
578 595Right-handed alpha
Helix 95
AK5
D
599 615Right-handed alpha
Helix 96
AK6
D
618 624Right-handed alpha
Helix 97
AK7
D
630 642Right-handed alpha
Helix 98
AK8
D
648 668Right-handed alpha
Helix 99
AK9
D
681 704Right-handed alpha
Helix 100
AL1
D
710 734Right-handed alpha
Helix 101
AL2
D
735 743Right-handed alpha
Helix 102
AL3
D
744 761Right-handed alpha
Helix 103
AL4
D
766 776Right-handed alpha
Helix 104
AL5
C
302 318Right-handed alpha
Helix 105
AL6
C
328 334Right-handed alpha
Helix 106
AL7
C
371 392Right-handed alpha
Helix 107
AL8
C
414 441Right-handed alpha
Helix 108
AL9
C
465 489Right-handed alpha
Helix 109
AM1
C
490 498Right-handed alpha
Helix 110
AM2
C
536 552Right-handed alpha
Helix 111
AM3
C
554 575Right-handed alpha
Helix 112
AM4
C
583 594Right-handed alpha
Helix 113
AM5
C
599 615Right-handed alpha
Helix 114
AM6
C
630 641Right-handed alpha
Helix 115
AM7
C
648 669Right-handed alpha
Helix 116
AM8
C
681 704Right-handed alpha
Helix 117
AM9
C
710 733Right-handed alpha
Helix 118
AN1
C
737 743Right-handed alpha
Helix 119
AN2
C
744 762Right-handed alpha
Helix 120
AN3
C
766 777Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9L4C.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
723 725first strand
Strand 2
B
746 748anti-parallel
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