Analysis of interatomic Contacts of Structural Units in PDB entry:
9L4N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9L4N entry

There is 1 chain in PDB entry 9L4N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2LEU 759
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9L4N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 13Right-handed alpha
Helix 2
AA2
A
34 39Right-handed alpha
Helix 3
AA3
A
39 53Right-handed alpha
Helix 4
AA4
A
54 59Right-handed 310
Helix 5
AA5
A
84 86Right-handed 310
Helix 6
AA6
A
87 102Right-handed alpha
Helix 7
AA7
A
115 126Right-handed alpha
Helix 8
AA8
A
127 130Right-handed 310
Helix 9
AA9
A
141 154Right-handed alpha
Helix 10
AB1
A
160 182Right-handed alpha
Helix 11
AB2
A
196 210Right-handed alpha
Helix 12
AB3
A
212 214Right-handed 310
Helix 13
AB4
A
249 254Right-handed alpha
Helix 14
AB5
A
270 276Right-handed alpha
Helix 15
AB6
A
294 302Right-handed alpha
Helix 16
AB7
A
319 322Right-handed 310
Helix 17
AB8
A
323 335Right-handed alpha
Helix 18
AB9
A
340 356Right-handed alpha
Helix 19
AC1
A
392 404Right-handed alpha
Helix 20
AC2
A
412 425Right-handed alpha
Helix 21
AC3
A
430 441Right-handed alpha
Helix 22
AC4
A
452 466Right-handed alpha
Helix 23
AC5
A
475 487Right-handed alpha
Helix 24
AC6
A
506 519Right-handed alpha
Helix 25
AC7
A
520 522Right-handed 310
Helix 26
AC8
A
524 535Right-handed alpha
Helix 27
AC9
A
535 546Right-handed alpha
Helix 28
AD1
A
559 572Right-handed alpha
Helix 29
AD2
A
605 623Right-handed alpha
Helix 30
AD3
A
642 659Right-handed alpha
Helix 31
AD4
A
669 675Right-handed alpha
Helix 32
AD5
A
675 683Right-handed alpha
Helix 33
AD6
A
699 714Right-handed alpha
Helix 34
AD7
A
739 756Right-handed alpha
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There are 4 sheets in PDB entry 9L4N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 110first strand
Strand 2
A
66 71parallel
Strand 3
A
133 135parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 217first strand
Strand 2
A
190 191parallel
Strand 3
A
259 262parallel
Strand 4
A
282 285parallel
Strand 5
A
306 307parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
497 499first strand
Strand 2
A
468 473parallel
Strand 3
A
443 447parallel
Strand 4
A
551 554parallel
Strand 5
A
731 733parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
663 668first strand
Strand 2
A
628 632parallel
Strand 3
A
694 696parallel
Strand 4
A
591 596parallel
Strand 5
A
581 588anti-parallel
Strand 6
A
723 725anti-parallel
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