Analysis of interatomic Contacts of Structural Units in PDB entry:
9L56


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9L56 entry

There are 2 chains in PDB entry 9L56 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 92SER 422
B
 SER 92SER 422
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 9L56. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
99 116Right-handed alpha
Helix 2
AA2
A
127 144Right-handed alpha
Helix 3
AA3
A
179 185Right-handed alpha
Helix 4
AA4
A
196 213Right-handed alpha
Helix 5
AA5
A
224 239Right-handed alpha
Helix 6
AA6
A
249 256Right-handed 310
Helix 7
AA7
A
276 285Right-handed alpha
Helix 8
AA8
A
288 290Right-handed 310
Helix 9
AA9
A
291 300Right-handed alpha
Helix 10
AB1
A
301 305Right-handed 310
Helix 11
AB2
A
313 325Right-handed alpha
Helix 12
AB3
A
326 333Right-handed alpha
Helix 13
AB4
A
334 337Right-handed 310
Helix 14
AB5
A
339 349Right-handed alpha
Helix 15
AB6
A
349 361Right-handed alpha
Helix 16
AB7
A
374 379Right-handed 310
Helix 17
AB8
A
387 399Right-handed alpha
Helix 18
AB9
A
406 420Right-handed alpha
Helix 19
AC1
B
99 116Right-handed alpha
Helix 20
AC2
B
125 144Right-handed alpha
Helix 21
AC3
B
179 185Right-handed alpha
Helix 22
AC4
B
196 213Right-handed alpha
Helix 23
AC5
B
224 239Right-handed alpha
Helix 24
AC6
B
249 256Right-handed 310
Helix 25
AC7
B
276 285Right-handed alpha
Helix 26
AC8
B
288 300Right-handed alpha
Helix 27
AC9
B
301 305Right-handed 310
Helix 28
AD1
B
313 325Right-handed alpha
Helix 29
AD2
B
326 333Right-handed alpha
Helix 30
AD3
B
334 337Right-handed 310
Helix 31
AD4
B
339 349Right-handed alpha
Helix 32
AD5
B
349 361Right-handed alpha
Helix 33
AD6
B
374 379Right-handed 310
Helix 34
AD7
B
387 399Right-handed alpha
Helix 35
AD8
B
406 418Right-handed alpha
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There are 2 sheets in PDB entry 9L56. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 218first strand
Strand 2
A
149 153parallel
Strand 3
A
93 98parallel
Strand 4
A
242 246parallel
Strand 5
A
260 265parallel
Strand 6
A
272 275anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 218first strand
Strand 2
B
149 153parallel
Strand 3
B
93 98parallel
Strand 4
B
242 246parallel
Strand 5
B
260 265parallel
Strand 6
B
272 275anti-parallel
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