Analysis of interatomic Contacts of Structural Units in PDB entry:
9L6O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9L6O entry

There are 4 chains in PDB entry 9L6O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TRP 318
F
 GLU 106ARG 674
B
 MET 1ALA 291
E
 ASP 8ARG 674
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 91 helices in PDB entry 9L6O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 20Right-handed 310
Helix 2
AA2
A
21 27Right-handed alpha
Helix 3
AA3
A
43 47Right-handed 310
Helix 4
AA4
A
53 76Right-handed alpha
Helix 5
AA5
A
77 80Right-handed 310
Helix 6
AA6
A
88 107Right-handed alpha
Helix 7
AA7
A
118 128Right-handed alpha
Helix 8
AA8
A
129 142Right-handed alpha
Helix 9
AA9
A
147 157Right-handed alpha
Helix 10
AB1
A
161 173Right-handed alpha
Helix 11
AB2
A
183 188Right-handed alpha
Helix 12
AB3
A
189 197Right-handed alpha
Helix 13
AB4
A
198 208Right-handed alpha
Helix 14
AB5
A
212 221Right-handed alpha
Helix 15
AB6
A
224 230Right-handed alpha
Helix 16
AB7
A
231 233Right-handed 310
Helix 17
AB8
A
234 241Right-handed alpha
Helix 18
AB9
A
242 246Right-handed 310
Helix 19
AC1
A
247 256Right-handed alpha
Helix 20
AC2
A
257 265Right-handed alpha
Helix 21
AC3
A
274 278Right-handed 310
Helix 22
AC4
A
280 286Right-handed alpha
Helix 23
AC5
A
294 298Right-handed 310
Helix 24
AC6
A
313 317Right-handed 310
Helix 25
AC7
F
107 111Right-handed 310
Helix 26
AC8
F
121 128Right-handed alpha
Helix 27
AC9
F
167 183Right-handed alpha
Helix 28
AD1
F
209 223Right-handed alpha
Helix 29
AD2
F
244 250Right-handed alpha
Helix 30
AD3
F
251 253Right-handed 310
Helix 31
AD4
F
273 276Right-handed 310
Helix 32
AD5
F
277 282Right-handed alpha
Helix 33
AD6
F
290 295Right-handed 310
Helix 34
AD7
F
326 337Right-handed alpha
Helix 35
AD8
F
403 407Right-handed 310
Helix 36
AD9
F
412 415Right-handed 310
Helix 37
AE1
F
416 422Right-handed alpha
Helix 38
AE2
F
437 443Right-handed alpha
Helix 39
AE3
F
466 496Right-handed alpha
Helix 40
AE4
F
510 518Right-handed alpha
Helix 41
AE5
F
525 535Right-handed alpha
Helix 42
AE6
F
543 555Right-handed alpha
Helix 43
AE7
F
571 575Right-handed 310
Helix 44
AE8
F
616 636Right-handed alpha
Helix 45
AE9
F
651 664Right-handed alpha
Helix 46
AF1
B
19 28Right-handed alpha
Helix 47
AF2
B
50 62Right-handed alpha
Helix 48
AF3
B
66 75Right-handed alpha
Helix 49
AF4
B
85 87Right-handed 310
Helix 50
AF5
B
88 93Right-handed alpha
Helix 51
AF6
B
93 101Right-handed alpha
Helix 52
AF7
B
102 108Right-handed 310
Helix 53
AF8
B
115 127Right-handed alpha
Helix 54
AF9
B
129 145Right-handed alpha
Helix 55
AG1
B
147 158Right-handed alpha
Helix 56
AG2
B
163 166Right-handed 310
Helix 57
AG3
B
167 176Right-handed alpha
Helix 58
AG4
B
185 208Right-handed alpha
Helix 59
AG5
B
215 224Right-handed alpha
Helix 60
AG6
B
224 230Right-handed alpha
Helix 61
AG7
B
230 243Right-handed alpha
Helix 62
AG8
B
248 267Right-handed alpha
Helix 63
AG9
E
9 27Right-handed alpha
Helix 64
AH1
E
41 46Right-handed alpha
Helix 65
AH2
E
55 59Right-handed 310
Helix 66
AH3
E
64 72Right-handed alpha
Helix 67
AH4
E
80 88Right-handed alpha
Helix 68
AH5
E
104 113Right-handed alpha
Helix 69
AH6
E
121 126Right-handed alpha
Helix 70
AH7
E
128 133Right-handed alpha
Helix 71
AH8
E
139 143Right-handed 310
Helix 72
AH9
E
167 178Right-handed alpha
Helix 73
AI1
E
209 225Right-handed alpha
Helix 74
AI2
E
244 250Right-handed alpha
Helix 75
AI3
E
273 282Right-handed alpha
Helix 76
AI4
E
292 297Right-handed alpha
Helix 77
AI5
E
310 315Right-handed alpha
Helix 78
AI6
E
326 341Right-handed alpha
Helix 79
AI7
E
348 353Right-handed alpha
Helix 80
AI8
E
401 406Right-handed alpha
Helix 81
AI9
E
409 428Right-handed alpha
Helix 82
AJ1
E
433 443Right-handed alpha
Helix 83
AJ2
E
453 460Right-handed alpha
Helix 84
AJ3
E
470 490Right-handed alpha
Helix 85
AJ4
E
505 510Right-handed alpha
Helix 86
AJ5
E
525 535Right-handed alpha
Helix 87
AJ6
E
541 548Right-handed alpha
Helix 88
AJ7
E
549 552Right-handed 310
Helix 89
AJ8
E
611 615Right-handed 310
Helix 90
AJ9
E
621 631Right-handed alpha
Helix 91
AK1
E
651 666Right-handed alpha
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There are 8 sheets in PDB entry 9L6O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
238 239first strand
Strand 2
F
269 271parallel
Strand 3
F
345 347parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
284 288first strand
Strand 2
F
321 325anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
398 400first strand
Strand 2
F
449 451parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
159 160first strand
Strand 2
E
187 188parallel
Strand 3
E
235 236parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
268 271first strand
Strand 2
E
344 347parallel
Strand 3
E
669 670anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
284 286first strand
Strand 2
E
323 325anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
363 364first strand
Strand 2
E
371 372anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
399 400first strand
Strand 2
E
450 451parallel
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