Analysis of interatomic Contacts of Structural Units in PDB entry:
9L6Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9L6Q entry

There are 2 chains in PDB entry 9L6Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 32PHE 728
C
 THR 29LEU 60
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 9L6Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 39Right-handed alpha
Helix 2
AA2
A
41 46Right-handed 310
Helix 3
AA3
A
47 56Right-handed alpha
Helix 4
AA4
A
61 82Right-handed alpha
Helix 5
AA5
A
84 86Right-handed 310
Helix 6
AA6
A
87 92Right-handed alpha
Helix 7
AA7
A
111 132Right-handed alpha
Helix 8
AA8
A
134 153Right-handed alpha
Helix 9
AA9
A
154 157Right-handed 310
Helix 10
AB1
A
158 174Right-handed alpha
Helix 11
AB2
A
181 187Right-handed alpha
Helix 12
AB3
A
197 219Right-handed alpha
Helix 13
AB4
A
220 225Right-handed alpha
Helix 14
AB5
A
235 237Right-handed 310
Helix 15
AB6
A
238 245Right-handed alpha
Helix 16
AB7
A
246 254Right-handed alpha
Helix 17
AB8
A
256 272Right-handed alpha
Helix 18
AB9
A
275 294Right-handed alpha
Helix 19
AC1
A
298 307Right-handed alpha
Helix 20
AC2
A
308 310Right-handed 310
Helix 21
AC3
A
314 323Right-handed alpha
Helix 22
AC4
A
357 377Right-handed alpha
Helix 23
AC5
A
378 380Right-handed 310
Helix 24
AC6
A
384 388Right-handed 310
Helix 25
AC7
A
435 439Right-handed 310
Helix 26
AC8
A
440 455Right-handed alpha
Helix 27
AC9
A
456 459Right-handed 310
Helix 28
AD1
A
487 491Right-handed 310
Helix 29
AD2
A
506 511Right-handed 310
Helix 30
AD3
A
512 523Right-handed alpha
Helix 31
AD4
A
605 625Right-handed alpha
Helix 32
AD5
A
654 675Right-handed alpha
Helix 33
AD6
A
676 708Right-handed alpha
Helix 34
AD7
A
712 724Right-handed alpha
Helix 35
AD8
C
33 38Right-handed alpha
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There are 4 sheets in PDB entry 9L6Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
195 196anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
479 480first strand
Strand 2
A
464 473anti-parallel
Strand 3
A
406 416anti-parallel
Strand 4
A
423 426anti-parallel
Strand 5
C
31 32anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
528 534first strand
Strand 2
A
597 603anti-parallel
Strand 3
A
551 557anti-parallel
Strand 4
A
578 581anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
539 543first strand
Strand 2
A
586 591anti-parallel
Strand 3
A
560 563anti-parallel
Strand 4
A
570 573anti-parallel
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