Analysis of interatomic Contacts of Structural Units in PDB entry:
9L93


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9L93 entry

There are 4 chains in PDB entry 9L93 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2550PRO 2700
B
 THR 2550PRO 2700
C
 ASP 396MET 442
D
 ASP 396MET 442
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 9L93. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2553 2557Right-handed 310
Helix 2
AA2
A
2559 2571Right-handed alpha
Helix 3
AA3
A
2621 2623Right-handed 310
Helix 4
AA4
B
2553 2557Right-handed 310
Helix 5
AA5
B
2559 2571Right-handed alpha
Helix 6
AA6
B
2621 2623Right-handed 310
Helix 7
AA7
C
399 404Right-handed alpha
Helix 8
AA8
C
412 416Right-handed 310
Helix 9
AA9
C
421 435Right-handed alpha
Helix 10
AB1
D
399 404Right-handed alpha
Helix 11
AB2
D
412 416Right-handed 310
Helix 12
AB3
D
421 436Right-handed alpha
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There are 4 sheets in PDB entry 9L93. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2616 2620first strand
Strand 2
A
2607 2611anti-parallel
Strand 3
A
2591 2597anti-parallel
Strand 4
A
2576 2579anti-parallel
Strand 5
A
2625 2629anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2686 2692first strand
Strand 2
A
2678 2683anti-parallel
Strand 3
A
2667 2672anti-parallel
Strand 4
A
2644 2647anti-parallel
Strand 5
A
2696 2698anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2616 2620first strand
Strand 2
B
2607 2611anti-parallel
Strand 3
B
2591 2597anti-parallel
Strand 4
B
2576 2579anti-parallel
Strand 5
B
2625 2629anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2686 2692first strand
Strand 2
B
2678 2683anti-parallel
Strand 3
B
2667 2672anti-parallel
Strand 4
B
2644 2647anti-parallel
Strand 5
B
2696 2698anti-parallel
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