Analysis of interatomic Contacts of Structural Units in PDB entry:
9LA7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LA7 entry

There are 4 chains in PDB entry 9LA7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 50HIS 354
D
 GLY 50HIS 354
B
 GLY 50HIS 354
C
 GLY 50HIS 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 9LA7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 89Right-handed alpha
Helix 2
AA2
A
94 96Right-handed 310
Helix 3
AA3
A
97 115Right-handed alpha
Helix 4
AA4
A
131 143Right-handed alpha
Helix 5
AA5
A
144 151Right-handed alpha
Helix 6
AA6
A
153 160Right-handed alpha
Helix 7
AA7
A
164 169Right-handed alpha
Helix 8
AA8
A
170 176Right-handed 310
Helix 9
AA9
A
177 191Right-handed alpha
Helix 10
AB1
A
195 225Right-handed alpha
Helix 11
AB2
A
227 234Right-handed 310
Helix 12
AB3
A
248 252Right-handed 310
Helix 13
AB4
A
253 270Right-handed alpha
Helix 14
AB5
A
281 313Right-handed alpha
Helix 15
AB6
A
314 333Right-handed alpha
Helix 16
AB7
A
336 349Right-handed alpha
Helix 17
AB8
D
62 90Right-handed alpha
Helix 18
AB9
D
94 96Right-handed 310
Helix 19
AC1
D
97 115Right-handed alpha
Helix 20
AC2
D
116 118Right-handed 310
Helix 21
AC3
D
131 143Right-handed alpha
Helix 22
AC4
D
143 151Right-handed alpha
Helix 23
AC5
D
153 161Right-handed alpha
Helix 24
AC6
D
164 177Right-handed 310
Helix 25
AC7
D
178 191Right-handed alpha
Helix 26
AC8
D
195 225Right-handed alpha
Helix 27
AC9
D
227 234Right-handed 310
Helix 28
AD1
D
253 270Right-handed alpha
Helix 29
AD2
D
281 313Right-handed alpha
Helix 30
AD3
D
314 334Right-handed alpha
Helix 31
AD4
D
336 353Right-handed alpha
Helix 32
AD5
B
62 89Right-handed alpha
Helix 33
AD6
B
94 96Right-handed 310
Helix 34
AD7
B
97 115Right-handed alpha
Helix 35
AD8
B
131 143Right-handed alpha
Helix 36
AD9
B
143 151Right-handed alpha
Helix 37
AE1
B
153 161Right-handed alpha
Helix 38
AE2
B
164 169Right-handed alpha
Helix 39
AE3
B
170 176Right-handed 310
Helix 40
AE4
B
177 190Right-handed alpha
Helix 41
AE5
B
195 226Right-handed alpha
Helix 42
AE6
B
227 234Right-handed 310
Helix 43
AE7
B
253 270Right-handed alpha
Helix 44
AE8
B
281 313Right-handed alpha
Helix 45
AE9
B
314 334Right-handed alpha
Helix 46
AF1
B
336 351Right-handed alpha
Helix 47
AF2
C
62 90Right-handed alpha
Helix 48
AF3
C
94 96Right-handed 310
Helix 49
AF4
C
97 117Right-handed alpha
Helix 50
AF5
C
131 143Right-handed alpha
Helix 51
AF6
C
143 151Right-handed alpha
Helix 52
AF7
C
153 161Right-handed alpha
Helix 53
AF8
C
164 169Right-handed alpha
Helix 54
AF9
C
170 177Right-handed 310
Helix 55
AG1
C
178 191Right-handed alpha
Helix 56
AG2
C
195 226Right-handed alpha
Helix 57
AG3
C
227 234Right-handed 310
Helix 58
AG4
C
248 252Right-handed 310
Helix 59
AG5
C
253 270Right-handed alpha
Helix 60
AG6
C
281 313Right-handed alpha
Helix 61
AG7
C
314 334Right-handed alpha
Helix 62
AG8
C
336 353Right-handed alpha
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There are 5 sheets in PDB entry 9LA7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 121first strand
Strand 2
A
128 129anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
120 121first strand
Strand 2
D
128 129anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 121first strand
Strand 2
B
128 129anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
120 121first strand
Strand 2
C
128 129anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
240 241first strand
Strand 2
C
244 245anti-parallel
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