Analysis of interatomic Contacts of Structural Units in PDB entry:
9LA9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LA9 entry

There are 2 chains in PDB entry 9LA9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 49PRO 1090
B
 TYR 6VAL 189
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 9LA9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 62Right-handed alpha
Helix 2
AA2
A
77 90Right-handed alpha
Helix 3
AA3
A
92 105Right-handed alpha
Helix 4
AA4
A
249 253Right-handed 310
Helix 5
AA5
A
290 295Right-handed alpha
Helix 6
AA6
A
296 316Right-handed alpha
Helix 7
AA7
A
328 337Right-handed alpha
Helix 8
AA8
A
345 364Right-handed alpha
Helix 9
AA9
A
367 370Right-handed 310
Helix 10
AB1
A
371 381Right-handed alpha
Helix 11
AB2
A
388 412Right-handed alpha
Helix 12
AB3
A
423 436Right-handed alpha
Helix 13
AB4
A
441 447Right-handed 310
Helix 14
AB5
A
453 477Right-handed alpha
Helix 15
AB6
A
483 508Right-handed alpha
Helix 16
AB7
A
510 515Right-handed alpha
Helix 17
AB8
A
520 545Right-handed alpha
Helix 18
AB9
A
549 569Right-handed alpha
Helix 19
AC1
A
570 573Right-handed 310
Helix 20
AC2
A
589 591Right-handed 310
Helix 21
AC3
A
592 615Right-handed alpha
Helix 22
AC4
A
627 648Right-handed alpha
Helix 23
AC5
A
651 686Right-handed alpha
Helix 24
AC6
A
690 719Right-handed alpha
Helix 25
AC7
A
720 726Right-handed alpha
Helix 26
AC8
A
735 741Right-handed alpha
Helix 27
AC9
A
741 754Right-handed alpha
Helix 28
AD1
A
758 779Right-handed alpha
Helix 29
AD2
A
791 806Right-handed alpha
Helix 30
AD3
A
810 833Right-handed alpha
Helix 31
AD4
A
842 857Right-handed alpha
Helix 32
AD5
A
871 883Right-handed alpha
Helix 33
AD6
A
887 905Right-handed alpha
Helix 34
AD7
A
956 960Right-handed 310
Helix 35
AD8
A
988 994Right-handed alpha
Helix 36
AD9
A
1054 1059Right-handed alpha
Helix 37
AE1
A
1065 1084Right-handed alpha
Helix 38
AE2
B
21 31Right-handed alpha
Helix 39
AE3
B
78 82Right-handed 310
Helix 40
AE4
B
83 90Right-handed 310
Helix 41
AE5
B
104 119Right-handed alpha
Helix 42
AE6
B
144 156Right-handed alpha
Helix 43
AE7
B
169 189Right-handed alpha
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There are 6 sheets in PDB entry 9LA9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 191first strand
Strand 2
A
111 121anti-parallel
Strand 3
A
275 280anti-parallel
Strand 4
A
257 262anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 191first strand
Strand 2
A
111 121anti-parallel
Strand 3
A
283 284anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 141first strand
Strand 2
A
199 206anti-parallel
Strand 3
A
241 246anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
978 986first strand
Strand 2
A
926 935anti-parallel
Strand 3
A
913 920anti-parallel
Strand 4
A
1039 1043anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
966 967first strand
Strand 2
A
951 955anti-parallel
Strand 3
A
998 1002anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 52first strand
Strand 2
B
67 74anti-parallel
Strand 3
B
8 16parallel
Strand 4
B
95 100parallel
Strand 5
B
128 133parallel
Strand 6
B
159 160parallel
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