Analysis of interatomic Contacts of Structural Units in PDB entry:
9LB7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LB7 entry

There is 1 chain in PDB entry 9LB7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 5THR 779
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 9LB7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 26Right-handed alpha
Helix 2
AA2
A
172 176Right-handed 310
Helix 3
AA3
A
257 267Right-handed alpha
Helix 4
AA4
A
270 290Right-handed alpha
Helix 5
AA5
A
299 315Right-handed alpha
Helix 6
AA6
A
316 321Right-handed alpha
Helix 7
AA7
A
335 340Right-handed 310
Helix 8
AA8
A
342 347Right-handed 310
Helix 9
AA9
A
348 356Right-handed alpha
Helix 10
AB1
A
356 370Right-handed alpha
Helix 11
AB2
A
370 381Right-handed alpha
Helix 12
AB3
A
416 421Right-handed 310
Helix 13
AB4
A
422 439Right-handed alpha
Helix 14
AB5
A
441 446Right-handed alpha
Helix 15
AB6
A
447 463Right-handed alpha
Helix 16
AB7
A
497 518Right-handed alpha
Helix 17
AB8
A
518 529Right-handed alpha
Helix 18
AB9
A
532 546Right-handed alpha
Helix 19
AC1
A
561 565Right-handed 310
Helix 20
AC2
A
569 578Right-handed alpha
Helix 21
AC3
A
582 590Right-handed alpha
Helix 22
AC4
A
593 597Right-handed 310
Helix 23
AC5
A
606 613Right-handed alpha
Helix 24
AC6
A
613 624Right-handed alpha
Helix 25
AC7
A
631 642Right-handed alpha
Helix 26
AC8
A
650 662Right-handed alpha
Helix 27
AC9
A
664 677Right-handed alpha
Helix 28
AD1
A
677 682Right-handed alpha
Helix 29
AD2
A
693 706Right-handed alpha
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There are 8 sheets in PDB entry 9LB7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 11first strand
Strand 2
A
100 108anti-parallel
Strand 3
A
114 122anti-parallel
Strand 4
A
125 135anti-parallel
Strand 5
A
142 151anti-parallel
Strand 6
A
241 251anti-parallel
Strand 7
A
203 212anti-parallel
Strand 8
A
192 197anti-parallel
Strand 9
A
183 189anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
33 35anti-parallel
Strand 3
A
52 54anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 65first strand
Strand 2
A
68 75anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
80 88anti-parallel
Strand 3
A
155 164anti-parallel
Strand 4
A
226 235anti-parallel
Strand 5
A
217 220anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 295first strand
Strand 2
A
728 737anti-parallel
Strand 3
A
740 747anti-parallel
Strand 4
A
750 755anti-parallel
Strand 5
A
776 778anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 405first strand
Strand 2
A
412 414anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 465first strand
Strand 2
A
471 472anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
711 712first strand
Strand 2
A
719 720anti-parallel
Strand 3
A
759 763parallel
Strand 4
A
766 770anti-parallel
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