Analysis of interatomic Contacts of Structural Units in PDB entry:
9LEH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LEH entry

There are 2 chains in PDB entry 9LEH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 12ALA 393
B
 VAL 12ALA 393
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9LEH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 25Right-handed alpha
Helix 2
AA2
A
38 51Right-handed alpha
Helix 3
AA3
A
68 78Right-handed alpha
Helix 4
AA4
A
88 96Right-handed alpha
Helix 5
AA5
A
96 103Right-handed alpha
Helix 6
AA6
A
106 110Right-handed 310
Helix 7
AA7
A
114 133Right-handed alpha
Helix 8
AA8
A
147 160Right-handed alpha
Helix 9
AA9
A
167 171Right-handed 310
Helix 10
AB1
A
175 186Right-handed alpha
Helix 11
AB2
A
221 225Right-handed 310
Helix 12
AB3
A
257 271Right-handed alpha
Helix 13
AB4
A
295 313Right-handed alpha
Helix 14
AB5
A
314 334Right-handed alpha
Helix 15
AB6
A
339 353Right-handed alpha
Helix 16
AB7
A
354 356Right-handed 310
Helix 17
AB8
A
384 392Right-handed alpha
Helix 18
AB9
B
17 25Right-handed alpha
Helix 19
AC1
B
38 51Right-handed alpha
Helix 20
AC2
B
68 78Right-handed alpha
Helix 21
AC3
B
88 96Right-handed alpha
Helix 22
AC4
B
96 103Right-handed alpha
Helix 23
AC5
B
106 110Right-handed 310
Helix 24
AC6
B
114 134Right-handed alpha
Helix 25
AC7
B
147 159Right-handed alpha
Helix 26
AC8
B
167 171Right-handed 310
Helix 27
AC9
B
175 186Right-handed alpha
Helix 28
AD1
B
221 225Right-handed 310
Helix 29
AD2
B
257 271Right-handed alpha
Helix 30
AD3
B
295 313Right-handed alpha
Helix 31
AD4
B
314 334Right-handed alpha
Helix 32
AD5
B
339 353Right-handed alpha
Helix 33
AD6
B
354 356Right-handed 310
Helix 34
AD7
B
384 392Right-handed alpha
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There are 6 sheets in PDB entry 9LEH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 87first strand
Strand 2
A
56 62parallel
Strand 3
A
31 34parallel
Strand 4
A
137 139parallel
Strand 5
A
164 166parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 200first strand
Strand 2
A
205 208anti-parallel
Strand 3
A
288 294anti-parallel
Strand 4
A
276 282anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 255first strand
Strand 2
A
247 251anti-parallel
Strand 3
A
237 244anti-parallel
Strand 4
A
358 364anti-parallel
Strand 5
A
369 376anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 87first strand
Strand 2
B
56 62parallel
Strand 3
B
31 34parallel
Strand 4
B
137 139parallel
Strand 5
B
164 166parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
197 200first strand
Strand 2
B
205 208anti-parallel
Strand 3
B
288 294anti-parallel
Strand 4
B
276 282anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 255first strand
Strand 2
B
247 251anti-parallel
Strand 3
B
237 244anti-parallel
Strand 4
B
358 364anti-parallel
Strand 5
B
369 376anti-parallel
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