Analysis of interatomic Contacts of Structural Units in PDB entry:
9LFF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LFF entry

There is 1 chain in PDB entry 9LFF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 23LYS 433
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 9LFF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 51Right-handed alpha
Helix 2
AA2
A
63 75Right-handed alpha
Helix 3
AA3
A
90 97Right-handed alpha
Helix 4
AA4
A
103 112Right-handed alpha
Helix 5
AA5
A
116 120Right-handed 310
Helix 6
AA6
A
121 129Right-handed alpha
Helix 7
AA7
A
151 157Right-handed alpha
Helix 8
AA8
A
164 178Right-handed alpha
Helix 9
AA9
A
188 194Right-handed alpha
Helix 10
AB1
A
194 201Right-handed alpha
Helix 11
AB2
A
206 211Right-handed alpha
Helix 12
AB3
A
223 236Right-handed alpha
Helix 13
AB4
A
237 241Right-handed 310
Helix 14
AB5
A
251 257Right-handed alpha
Helix 15
AB6
A
269 277Right-handed alpha
Helix 16
AB7
A
313 328Right-handed alpha
Helix 17
AB8
A
329 341Right-handed alpha
Helix 18
AB9
A
346 356Right-handed alpha
Helix 19
AC1
A
357 362Right-handed alpha
Helix 20
AC2
A
366 373Right-handed alpha
Helix 21
AC3
A
378 382Right-handed 310
Helix 22
AC4
A
388 405Right-handed alpha
Helix 23
AC5
A
409 432Right-handed alpha
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There are 2 sheets in PDB entry 9LFF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 60first strand
Strand 2
A
24 30parallel
Strand 3
A
83 87parallel
Strand 4
A
302 308anti-parallel
Strand 5
A
138 143anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 186first strand
Strand 2
A
260 266parallel
Strand 3
A
145 150anti-parallel
Strand 4
A
281 284anti-parallel
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