Analysis of interatomic Contacts of Structural Units in PDB entry:
9LGB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LGB entry

There is 1 chain in PDB entry 9LGB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 14LEU 1514
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 9LGB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 60Right-handed alpha
Helix 2
AA2
A
68 94Right-handed alpha
Helix 3
AA3
A
104 130Right-handed alpha
Helix 4
AA4
A
136 160Right-handed alpha
Helix 5
AA5
A
171 191Right-handed alpha
Helix 6
AA6
A
214 221Right-handed alpha
Helix 7
AA7
A
224 234Right-handed alpha
Helix 8
AA8
A
249 268Right-handed alpha
Helix 9
AA9
A
314 319Right-handed alpha
Helix 10
AB1
A
321 355Right-handed alpha
Helix 11
AB2
A
359 408Right-handed alpha
Helix 12
AB3
A
411 418Right-handed alpha
Helix 13
AB4
A
419 442Right-handed alpha
Helix 14
AB5
A
442 463Right-handed alpha
Helix 15
AB6
A
464 511Right-handed alpha
Helix 16
AB7
A
511 516Right-handed alpha
Helix 17
AB8
A
520 572Right-handed alpha
Helix 18
AB9
A
578 621Right-handed alpha
Helix 19
AC1
A
683 692Right-handed alpha
Helix 20
AC2
A
721 728Right-handed alpha
Helix 21
AC3
A
733 744Right-handed alpha
Helix 22
AC4
A
746 753Right-handed alpha
Helix 23
AC5
A
755 759Right-handed 310
Helix 24
AC6
A
769 785Right-handed alpha
Helix 25
AC7
A
799 810Right-handed alpha
Helix 26
AC8
A
831 835Right-handed 310
Helix 27
AC9
A
851 859Right-handed alpha
Helix 28
AD1
A
860 869Right-handed alpha
Helix 29
AD2
A
958 970Right-handed alpha
Helix 30
AD3
A
970 1000Right-handed alpha
Helix 31
AD4
A
1010 1058Right-handed alpha
Helix 32
AD5
A
1059 1066Right-handed alpha
Helix 33
AD6
A
1067 1075Right-handed alpha
Helix 34
AD7
A
1076 1111Right-handed alpha
Helix 35
AD8
A
1112 1116Right-handed 310
Helix 36
AD9
A
1117 1160Right-handed alpha
Helix 37
AE1
A
1160 1168Right-handed alpha
Helix 38
AE2
A
1169 1220Right-handed alpha
Helix 39
AE3
A
1225 1257Right-handed alpha
Helix 40
AE4
A
1257 1264Right-handed alpha
Helix 41
AE5
A
1265 1268Right-handed 310
Helix 42
AE6
A
1331 1340Right-handed alpha
Helix 43
AE7
A
1361 1368Right-handed alpha
Helix 44
AE8
A
1382 1388Right-handed alpha
Helix 45
AE9
A
1394 1405Right-handed alpha
Helix 46
AF1
A
1407 1412Right-handed alpha
Helix 47
AF2
A
1416 1420Right-handed 310
Helix 48
AF3
A
1430 1446Right-handed alpha
Helix 49
AF4
A
1463 1474Right-handed alpha
Helix 50
AF5
A
1486 1493Right-handed alpha
Helix 51
AF6
A
1509 1514Right-handed alpha
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There are 5 sheets in PDB entry 9LGB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
661 668first strand
Strand 2
A
644 652anti-parallel
Strand 3
A
696 702anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
708 711first strand
Strand 2
A
788 792parallel
Strand 3
A
821 825parallel
Strand 4
A
673 677parallel
Strand 5
A
837 840parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1309 1316first strand
Strand 2
A
1292 1299anti-parallel
Strand 3
A
1345 1347anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1309 1316first strand
Strand 2
A
1292 1299anti-parallel
Strand 3
A
1351 1352anti-parallel
Strand 4
A
1355 1356anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1369 1372first strand
Strand 2
A
1449 1453parallel
Strand 3
A
1479 1483parallel
Strand 4
A
1322 1326parallel
Strand 5
A
1496 1499parallel
Strand 6
A
1504 1508anti-parallel
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