Analysis of interatomic Contacts of Structural Units in PDB entry:
9LGO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LGO entry

There are 10 chains in PDB entry 9LGO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 43GLU 886
J
SER 17LEU 212
I
SER 17LEU 212
H
MET 63GLU 265
G
ASP 66GLU 265
F
PRO 12PHE 747
E
GLY 44PRO 871
D
SER 43GLN 885
C
GLY 11PHE 747
B
GLY 44PRO 871
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are198 helices in PDB entry 9LGO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
60 64Right-handed 310
Helix 2
AA2
A
71 78Right-handed alpha
Helix 3
AA3
A
114 122Right-handed alpha
Helix 4
AA4
A
156 168Right-handed alpha
Helix 5
AA5
A
358 369Right-handed alpha
Helix 6
AA6
A
378 383Right-handed alpha
Helix 7
AA7
A
399 409Right-handed alpha
Helix 8
AA8
A
430 444Right-handed alpha
Helix 9
AA9
A
454 459Right-handed alpha
Helix 10
AB1
A
474 482Right-handed alpha
Helix 11
AB2
A
506 510Right-handed 310
Helix 12
AB3
A
525 537Right-handed alpha
Helix 13
AB4
A
545 556Right-handed alpha
Helix 14
AB5
A
560 581Right-handed alpha
Helix 15
AB6
A
598 609Right-handed alpha
Helix 16
AB7
A
632 644Right-handed alpha
Helix 17
AB8
A
644 649Right-handed alpha
Helix 18
AB9
A
650 657Right-handed alpha
Helix 19
AC1
A
672 685Right-handed alpha
Helix 20
AC2
A
695 700Right-handed alpha
Helix 21
AC3
A
704 720Right-handed alpha
Helix 22
AC4
A
746 758Right-handed alpha
Helix 23
AC5
A
759 761Right-handed 310
Helix 24
AC6
A
779 784Right-handed 310
Helix 25
AC7
A
798 810Right-handed alpha
Helix 26
AC8
A
820 828Right-handed alpha
Helix 27
AC9
A
832 850Right-handed alpha
Helix 28
AD1
A
859 869Right-handed alpha
Helix 29
AD2
A
874 884Right-handed alpha
Helix 30
AD3
J
18 60Right-handed alpha
Helix 31
AD4
J
85 128Right-handed alpha
Helix 32
AD5
J
142 170Right-handed alpha
Helix 33
AD6
J
171 173Right-handed 310
Helix 34
AD7
J
175 189Right-handed alpha
Helix 35
AD8
J
194 206Right-handed alpha
Helix 36
AD9
I
18 61Right-handed alpha
Helix 37
AE1
I
85 127Right-handed alpha
Helix 38
AE2
I
141 170Right-handed alpha
Helix 39
AE3
I
175 189Right-handed alpha
Helix 40
AE4
I
195 208Right-handed alpha
Helix 41
AE5
H
65 97Right-handed alpha
Helix 42
AE6
H
97 116Right-handed alpha
Helix 43
AE7
H
130 178Right-handed alpha
Helix 44
AE8
H
183 188Right-handed alpha
Helix 45
AE9
H
196 224Right-handed alpha
Helix 46
AF1
H
230 245Right-handed alpha
Helix 47
AF2
H
251 265Right-handed alpha
Helix 48
AF3
G
67 117Right-handed alpha
Helix 49
AF4
G
130 178Right-handed alpha
Helix 50
AF5
G
183 188Right-handed alpha
Helix 51
AF6
G
196 224Right-handed alpha
Helix 52
AF7
G
230 235Right-handed alpha
Helix 53
AF8
G
235 247Right-handed alpha
Helix 54
AF9
G
251 264Right-handed alpha
Helix 55
AG1
F
32 40Right-handed alpha
Helix 56
AG2
F
128 139Right-handed alpha
Helix 57
AG3
F
205 217Right-handed alpha
Helix 58
AG4
F
218 221Right-handed 310
Helix 59
AG5
F
224 229Right-handed alpha
Helix 60
AG6
F
246 258Right-handed alpha
Helix 61
AG7
F
278 286Right-handed alpha
Helix 62
AG8
F
286 292Right-handed alpha
Helix 63
AG9
F
315 332Right-handed alpha
Helix 64
AH1
F
351 356Right-handed alpha
Helix 65
AH2
F
370 385Right-handed alpha
Helix 66
AH3
F
393 400Right-handed alpha
Helix 67
AH4
F
404 418Right-handed alpha
Helix 68
AH5
F
433 441Right-handed alpha
Helix 69
AH6
F
462 466Right-handed 310
Helix 70
AH7
F
469 478Right-handed alpha
Helix 71
AH8
F
481 486Right-handed alpha
Helix 72
AH9
F
486 493Right-handed alpha
Helix 73
AI1
F
511 523Right-handed alpha
Helix 74
AI2
F
530 535Right-handed alpha
Helix 75
AI3
F
542 554Right-handed alpha
Helix 76
AI4
F
565 570Right-handed alpha
Helix 77
AI5
F
582 597Right-handed alpha
Helix 78
AI6
F
654 666Right-handed alpha
Helix 79
AI7
F
676 684Right-handed alpha
Helix 80
AI8
F
688 707Right-handed alpha
Helix 81
AI9
F
715 722Right-handed alpha
Helix 82
AJ1
F
731 742Right-handed alpha
Helix 83
AJ2
E
71 78Right-handed alpha
Helix 84
AJ3
E
114 122Right-handed alpha
Helix 85
AJ4
E
149 153Right-handed 310
Helix 86
AJ5
E
156 168Right-handed alpha
Helix 87
AJ6
E
182 186Right-handed 310
Helix 88
AJ7
E
401 409Right-handed alpha
Helix 89
AJ8
E
432 437Right-handed alpha
Helix 90
AJ9
E
454 459Right-handed alpha
Helix 91
AK1
E
474 480Right-handed alpha
Helix 92
AK2
E
506 511Right-handed 310
Helix 93
AK3
E
546 548Right-handed 310
Helix 94
AK4
E
549 556Right-handed alpha
Helix 95
AK5
E
561 573Right-handed alpha
Helix 96
AK6
E
574 576Right-handed 310
Helix 97
AK7
E
577 583Right-handed alpha
Helix 98
AK8
E
587 592Right-handed alpha
Helix 99
AK9
E
599 609Right-handed alpha
Helix 100
AL1
E
633 641Right-handed alpha
Helix 101
AL2
E
644 649Right-handed alpha
Helix 102
AL3
E
650 657Right-handed alpha
Helix 103
AL4
E
672 685Right-handed alpha
Helix 104
AL5
E
694 699Right-handed alpha
Helix 105
AL6
E
701 719Right-handed alpha
Helix 106
AL7
E
729 732Right-handed 310
Helix 107
AL8
E
741 760Right-handed alpha
Helix 108
AL9
E
779 784Right-handed 310
Helix 109
AM1
E
798 810Right-handed alpha
Helix 110
AM2
E
820 827Right-handed alpha
Helix 111
AM3
E
834 850Right-handed alpha
Helix 112
AM4
E
858 869Right-handed alpha
Helix 113
AM5
D
60 65Right-handed 310
Helix 114
AM6
D
71 79Right-handed alpha
Helix 115
AM7
D
114 121Right-handed alpha
Helix 116
AM8
D
156 168Right-handed alpha
Helix 117
AM9
D
358 375Right-handed alpha
Helix 118
AN1
D
377 383Right-handed alpha
Helix 119
AN2
D
399 412Right-handed alpha
Helix 120
AN3
D
429 440Right-handed alpha
Helix 121
AN4
D
454 459Right-handed alpha
Helix 122
AN5
D
467 469Right-handed 310
Helix 123
AN6
D
470 483Right-handed alpha
Helix 124
AN7
D
484 487Right-handed 310
Helix 125
AN8
D
525 537Right-handed alpha
Helix 126
AN9
D
545 556Right-handed alpha
Helix 127
AO1
D
560 582Right-handed alpha
Helix 128
AO2
D
599 609Right-handed alpha
Helix 129
AO3
D
625 630Right-handed alpha
Helix 130
AO4
D
632 644Right-handed alpha
Helix 131
AO5
D
644 649Right-handed alpha
Helix 132
AO6
D
650 657Right-handed alpha
Helix 133
AO7
D
672 685Right-handed alpha
Helix 134
AO8
D
693 700Right-handed alpha
Helix 135
AO9
D
703 719Right-handed alpha
Helix 136
AP1
D
749 758Right-handed alpha
Helix 137
AP2
D
798 812Right-handed alpha
Helix 138
AP3
D
820 828Right-handed alpha
Helix 139
AP4
D
832 851Right-handed alpha
Helix 140
AP5
D
858 869Right-handed alpha
Helix 141
AP6
D
874 885Right-handed alpha
Helix 142
AP7
C
20 24Right-handed 310
Helix 143
AP8
C
32 40Right-handed alpha
Helix 144
AP9
C
84 88Right-handed 310
Helix 145
AQ1
C
127 139Right-handed alpha
Helix 146
AQ2
C
205 222Right-handed alpha
Helix 147
AQ3
C
246 259Right-handed alpha
Helix 148
AQ4
C
277 292Right-handed alpha
Helix 149
AQ5
C
320 330Right-handed alpha
Helix 150
AQ6
C
331 334Right-handed 310
Helix 151
AQ7
C
351 356Right-handed 310
Helix 152
AQ8
C
371 382Right-handed alpha
Helix 153
AQ9
C
394 400Right-handed alpha
Helix 154
AR1
C
404 422Right-handed alpha
Helix 155
AR2
C
433 444Right-handed alpha
Helix 156
AR3
C
462 466Right-handed 310
Helix 157
AR4
C
469 478Right-handed alpha
Helix 158
AR5
C
480 486Right-handed alpha
Helix 159
AR6
C
486 493Right-handed alpha
Helix 160
AR7
C
510 523Right-handed alpha
Helix 161
AR8
C
541 554Right-handed alpha
Helix 162
AR9
C
565 570Right-handed alpha
Helix 163
AS1
C
581 595Right-handed alpha
Helix 164
AS2
C
630 634Right-handed 310
Helix 165
AS3
C
635 640Right-handed 310
Helix 166
AS4
C
654 667Right-handed alpha
Helix 167
AS5
C
676 684Right-handed alpha
Helix 168
AS6
C
688 708Right-handed alpha
Helix 169
AS7
C
715 723Right-handed alpha
Helix 170
AS8
C
731 745Right-handed alpha
Helix 171
AS9
B
61 65Right-handed 310
Helix 172
AT1
B
71 79Right-handed alpha
Helix 173
AT2
B
114 122Right-handed alpha
Helix 174
AT3
B
149 153Right-handed 310
Helix 175
AT4
B
156 168Right-handed alpha
Helix 176
AT5
B
360 365Right-handed alpha
Helix 177
AT6
B
369 375Right-handed alpha
Helix 178
AT7
B
402 410Right-handed alpha
Helix 179
AT8
B
428 443Right-handed alpha
Helix 180
AT9
B
471 478Right-handed alpha
Helix 181
AU1
B
501 505Right-handed 310
Helix 182
AU2
B
529 537Right-handed alpha
Helix 183
AU3
B
563 573Right-handed alpha
Helix 184
AU4
B
575 583Right-handed alpha
Helix 185
AU5
B
598 603Right-handed alpha
Helix 186
AU6
B
633 644Right-handed alpha
Helix 187
AU7
B
644 649Right-handed alpha
Helix 188
AU8
B
650 657Right-handed alpha
Helix 189
AU9
B
672 685Right-handed alpha
Helix 190
AV1
B
694 698Right-handed alpha
Helix 191
AV2
B
701 719Right-handed alpha
Helix 192
AV3
B
729 732Right-handed 310
Helix 193
AV4
B
739 760Right-handed alpha
Helix 194
AV5
B
774 778Right-handed 310
Helix 195
AV6
B
798 810Right-handed alpha
Helix 196
AV7
B
820 827Right-handed alpha
Helix 197
AV8
B
832 851Right-handed alpha
Helix 198
AV9
B
858 869Right-handed alpha
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There are 35 sheets in PDB entry 9LGO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
45 49first strand
Strand 2
A
110 112parallel
Strand 3
A
67 70anti-parallel
Strand 4
A
95 102parallel
Strand 5
A
85 89anti-parallel
Strand 6
A
128 133anti-parallel
Strand 7
A
45 49anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
172 173first strand
Strand 2
A
322 325anti-parallel
Strand 3
A
137 148parallel
Strand 4
A
186 197anti-parallel
Strand 5
A
178 183anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
172 173first strand
Strand 2
A
322 325anti-parallel
Strand 3
A
137 148parallel
Strand 4
A
331 335parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
415 418first strand
Strand 2
A
449 453parallel
Strand 3
A
494 499parallel
Strand 4
A
389 393parallel
Strand 5
A
515 520parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
688 692first strand
Strand 2
A
722 726parallel
Strand 3
A
766 772parallel
Strand 4
A
664 667parallel
Strand 5
A
790 793parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
71 72first strand
Strand 2
F
13 16parallel
Strand 3
F
93 95anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
28 31first strand
Strand 2
F
56 63parallel
Strand 3
F
46 50anti-parallel
Strand 4
F
99 101anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
28 31first strand
Strand 2
F
56 63parallel
Strand 3
F
78 79anti-parallel
Strand 4
F
149 151anti-parallel
Strand 5
F
160 168anti-parallel
Strand 6
F
109 116anti-parallel
Strand 7
F
183 186parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
143 144first strand
Strand 2
F
176 177anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
261 263first strand
Strand 2
F
298 303parallel
Strand 3
F
339 344parallel
Strand 4
F
238 240parallel
Strand 5
F
363 365parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
525 529first strand
Strand 2
F
559 564parallel
Strand 3
F
622 628parallel
Strand 4
F
501 504parallel
Strand 5
F
647 649parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
47 50first strand
Strand 2
E
110 113parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
95 99first strand
Strand 2
E
85 89anti-parallel
Strand 3
E
130 133anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
191 197first strand
Strand 2
E
138 147anti-parallel
Strand 3
E
323 325parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
191 197first strand
Strand 2
E
138 147anti-parallel
Strand 3
E
331 335parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
392 393first strand
Strand 2
E
498 499parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
415 418first strand
Strand 2
E
449 452parallel
Strand 3
E
495 496parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
688 693first strand
Strand 2
E
722 727parallel
Strand 3
E
766 772parallel
Strand 4
E
663 667parallel
Strand 5
E
788 793parallel
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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
45 50first strand
Strand 2
D
110 113parallel
Strand 3
D
67 70anti-parallel
Strand 4
D
95 102parallel
Strand 5
D
85 89anti-parallel
Strand 6
D
128 133anti-parallel
Strand 7
D
45 50anti-parallel
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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
172 173first strand
Strand 2
D
322 325anti-parallel
Strand 3
D
137 148parallel
Strand 4
D
186 197anti-parallel
Strand 5
D
178 183anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
172 173first strand
Strand 2
D
322 325anti-parallel
Strand 3
D
137 148parallel
Strand 4
D
331 335parallel
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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
415 418first strand
Strand 2
D
448 452parallel
Strand 3
D
493 499parallel
Strand 4
D
389 393parallel
Strand 5
D
517 520parallel
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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
688 692first strand
Strand 2
D
722 726parallel
Strand 3
D
766 772parallel
Strand 4
D
663 667parallel
Strand 5
D
788 793parallel
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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
71 72first strand
Strand 2
C
13 16parallel
Strand 3
C
93 95anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
28 31first strand
Strand 2
C
56 63parallel
Strand 3
C
46 50anti-parallel
Strand 4
C
99 101anti-parallel
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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
28 31first strand
Strand 2
C
56 63parallel
Strand 3
C
78 79anti-parallel
Strand 4
C
149 151anti-parallel
Strand 5
C
160 168anti-parallel
Strand 6
C
109 116anti-parallel
Strand 7
C
183 185parallel
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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
262 265first strand
Strand 2
C
299 302parallel
Strand 3
C
340 344parallel
Strand 4
C
236 240parallel
Strand 5
C
362 365parallel
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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
525 529first strand
Strand 2
C
559 564parallel
Strand 3
C
622 628parallel
Strand 4
C
501 504parallel
Strand 5
C
646 649parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
47 50first strand
Strand 2
B
110 113parallel
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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
67 69first strand
Strand 2
B
95 101parallel
Strand 3
B
85 89anti-parallel
Strand 4
B
130 133anti-parallel
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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
139 140first strand
Strand 2
B
324 325parallel
Strand 3
B
172 173anti-parallel
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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
178 183first strand
Strand 2
B
186 196anti-parallel
Strand 3
B
202 203anti-parallel
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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
178 183first strand
Strand 2
B
186 196anti-parallel
Strand 3
B
143 147anti-parallel
Strand 4
B
331 334parallel
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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
415 419first strand
Strand 2
B
449 453parallel
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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
688 693first strand
Strand 2
B
722 727parallel
Strand 3
B
766 772parallel
Strand 4
B
663 667parallel
Strand 5
B
788 793parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il