Analysis of interatomic Contacts of Structural Units in PDB entry:
9LGT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LGT entry

There are 2 chains in PDB entry 9LGT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 29ASP 410
B
 ALA 29ASP 410
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 9LGT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 40Right-handed alpha
Helix 2
AA2
A
40 46Right-handed alpha
Helix 3
AA3
A
46 58Right-handed alpha
Helix 4
AA4
A
65 81Right-handed alpha
Helix 5
AA5
A
82 95Right-handed alpha
Helix 6
AA6
A
99 125Right-handed alpha
Helix 7
AA7
A
131 150Right-handed alpha
Helix 8
AA8
A
156 160Right-handed 310
Helix 9
AA9
A
167 172Right-handed alpha
Helix 10
AB1
A
174 204Right-handed alpha
Helix 11
AB2
A
205 221Right-handed alpha
Helix 12
AB3
A
222 224Right-handed 310
Helix 13
AB4
A
225 236Right-handed alpha
Helix 14
AB5
A
250 258Right-handed alpha
Helix 15
AB6
A
259 266Right-handed alpha
Helix 16
AB7
A
267 273Right-handed 310
Helix 17
AB8
A
274 281Right-handed alpha
Helix 18
AB9
A
281 294Right-handed alpha
Helix 19
AC1
A
295 297Right-handed 310
Helix 20
AC2
A
298 317Right-handed alpha
Helix 21
AC3
A
319 328Right-handed alpha
Helix 22
AC4
A
330 352Right-handed alpha
Helix 23
AC5
A
362 369Right-handed alpha
Helix 24
AC6
A
370 373Right-handed 310
Helix 25
AC7
A
375 402Right-handed alpha
Helix 26
AC8
B
30 40Right-handed alpha
Helix 27
AC9
B
40 45Right-handed alpha
Helix 28
AD1
B
46 59Right-handed alpha
Helix 29
AD2
B
65 82Right-handed alpha
Helix 30
AD3
B
82 95Right-handed alpha
Helix 31
AD4
B
99 124Right-handed alpha
Helix 32
AD5
B
132 150Right-handed alpha
Helix 33
AD6
B
156 160Right-handed 310
Helix 34
AD7
B
164 166Right-handed 310
Helix 35
AD8
B
167 204Right-handed alpha
Helix 36
AD9
B
205 221Right-handed alpha
Helix 37
AE1
B
225 237Right-handed alpha
Helix 38
AE2
B
250 258Right-handed alpha
Helix 39
AE3
B
259 266Right-handed alpha
Helix 40
AE4
B
267 273Right-handed 310
Helix 41
AE5
B
274 281Right-handed alpha
Helix 42
AE6
B
281 294Right-handed alpha
Helix 43
AE7
B
295 297Right-handed 310
Helix 44
AE8
B
298 316Right-handed alpha
Helix 45
AE9
B
319 327Right-handed alpha
Helix 46
AF1
B
330 352Right-handed alpha
Helix 47
AF2
B
362 369Right-handed alpha
Helix 48
AF3
B
370 373Right-handed 310
Helix 49
AF4
B
375 402Right-handed alpha
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There are 2 sheets in PDB entry 9LGT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 241first strand
Strand 2
A
247 248anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
240 241first strand
Strand 2
B
247 248anti-parallel
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