Analysis of interatomic Contacts of Structural Units in PDB entry:
9LH4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LH4 entry

There is 1 chain in PDB entry 9LH4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 120PRO 456
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 9LH4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
126 135Right-handed alpha
Helix 2
AA2
A
138 157Right-handed alpha
Helix 3
AA3
A
162 180Right-handed alpha
Helix 4
AA4
A
180 187Right-handed alpha
Helix 5
AA5
A
189 191Right-handed 310
Helix 6
AA6
A
192 206Right-handed alpha
Helix 7
AA7
A
209 220Right-handed alpha
Helix 8
AA8
A
221 245Right-handed alpha
Helix 9
AA9
A
246 247Right-handed 310
Helix 10
AB1
A
252 256Right-handed 310
Helix 11
AB2
A
302 315Right-handed alpha
Helix 12
AB3
A
408 412Right-handed 310
Helix 13
AB4
A
428 435Right-handed 310
Helix 14
AB5
A
449 451Right-handed 310
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There are 4 sheets in PDB entry 9LH4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 261first strand
Strand 2
A
453 454anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 326first strand
Strand 2
A
329 332anti-parallel
Strand 3
A
391 400anti-parallel
Strand 4
A
344 345anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 326first strand
Strand 2
A
329 332anti-parallel
Strand 3
A
391 400anti-parallel
Strand 4
A
379 384anti-parallel
Strand 5
A
421 425anti-parallel
Strand 6
A
290 298anti-parallel
Strand 7
A
264 272anti-parallel
Strand 8
A
440 448anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 348first strand
Strand 2
A
357 358anti-parallel
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