Analysis of interatomic Contacts of Structural Units in PDB entry:
9LHG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9LHG entry

There are 2 chains in PDB entry 9LHG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ALA 486
B	MET 1	ALA 486

There are 44 helices in PDB entry 9LHG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	20	Right-handed alpha
Helix 2	AA2	A	31	39	Right-handed alpha
Helix 3	AA3	A	39	45	Right-handed alpha
Helix 4	AA4	A	52	56	Right-handed 310
Helix 5	AA5	A	58	73	Right-handed alpha
Helix 6	AA6	A	83	88	Right-handed alpha
Helix 7	AA7	A	112	123	Right-handed alpha
Helix 8	AA8	A	124	141	Right-handed alpha
Helix 9	AA9	A	160	166	Right-handed alpha
Helix 10	AB1	A	174	179	Right-handed 310
Helix 11	AB2	A	180	197	Right-handed alpha
Helix 12	AB3	A	208	218	Right-handed alpha
Helix 13	AB4	A	219	223	Right-handed 310
Helix 14	AB5	A	230	254	Right-handed alpha
Helix 15	AB6	A	273	275	Right-handed 310
Helix 16	AB7	A	276	288	Right-handed alpha
Helix 17	AB8	A	288	298	Right-handed alpha
Helix 18	AB9	A	363	378	Right-handed alpha
Helix 19	AC1	A	395	413	Right-handed alpha
Helix 20	AC2	A	430	437	Right-handed 310
Helix 21	AC3	A	454	467	Right-handed alpha
Helix 22	AC4	A	470	478	Right-handed 310
Helix 23	AC5	B	15	20	Right-handed alpha
Helix 24	AC6	B	31	39	Right-handed alpha
Helix 25	AC7	B	39	45	Right-handed alpha
Helix 26	AC8	B	52	56	Right-handed 310
Helix 27	AC9	B	58	73	Right-handed alpha
Helix 28	AD1	B	83	88	Right-handed alpha
Helix 29	AD2	B	112	123	Right-handed alpha
Helix 30	AD3	B	124	141	Right-handed alpha
Helix 31	AD4	B	160	167	Right-handed alpha
Helix 32	AD5	B	174	179	Right-handed 310
Helix 33	AD6	B	180	197	Right-handed alpha
Helix 34	AD7	B	208	218	Right-handed alpha
Helix 35	AD8	B	219	223	Right-handed 310
Helix 36	AD9	B	230	254	Right-handed alpha
Helix 37	AE1	B	273	275	Right-handed 310
Helix 38	AE2	B	276	288	Right-handed alpha
Helix 39	AE3	B	288	298	Right-handed alpha
Helix 40	AE4	B	363	378	Right-handed alpha
Helix 41	AE5	B	395	413	Right-handed alpha
Helix 42	AE6	B	430	437	Right-handed 310
Helix 43	AE7	B	454	467	Right-handed alpha
Helix 44	AE8	B	470	478	Right-handed 310

There are 12 sheets in PDB entry 9LHG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	3	first strand
Strand 2	A	468	469	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	13	first strand
Strand 2	A	77	81	parallel
Strand 3	A	144	148	parallel
Strand 4	A	202	207	parallel
Strand 5	A	260	265	parallel
Strand 6	A	315	318	parallel
Strand 7	A	381	385	parallel
Strand 8	A	417	422	parallel
Strand 9	A	9	13	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	102	first strand
Strand 2	A	105	110	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	271	first strand
Strand 2	A	323	328	parallel
Strand 3	A	331	334	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	299	300	first strand
Strand 2	A	303	304	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	442	444	first strand
Strand 2	A	451	453	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	3	first strand
Strand 2	B	468	469	anti-parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	13	first strand
Strand 2	B	77	81	parallel
Strand 3	B	144	148	parallel
Strand 4	B	202	207	parallel
Strand 5	B	260	265	parallel
Strand 6	B	315	318	parallel
Strand 7	B	381	385	parallel
Strand 8	B	417	422	parallel
Strand 9	B	9	13	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	102	first strand
Strand 2	B	105	110	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	271	first strand
Strand 2	B	323	328	parallel
Strand 3	B	331	334	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	299	300	first strand
Strand 2	B	303	304	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	442	444	first strand
Strand 2	B	451	453	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9LHG

Analysis of interatomic Contacts of Structural Units in PDB entry:
9LHG