Analysis of interatomic Contacts of Structural Units in PDB entry:
9LHI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9LHI entry

There are 4 chains in PDB entry 9LHI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ILE 486
B	MET 1	ILE 486
C	MET 1	ARG 488
D	MET 1	ARG 488

There are 90 helices in PDB entry 9LHI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	20	Right-handed alpha
Helix 2	AA2	A	31	39	Right-handed alpha
Helix 3	AA3	A	39	45	Right-handed alpha
Helix 4	AA4	A	52	56	Right-handed 310
Helix 5	AA5	A	58	73	Right-handed alpha
Helix 6	AA6	A	83	88	Right-handed alpha
Helix 7	AA7	A	112	123	Right-handed alpha
Helix 8	AA8	A	124	141	Right-handed alpha
Helix 9	AA9	A	160	167	Right-handed alpha
Helix 10	AB1	A	174	179	Right-handed 310
Helix 11	AB2	A	180	197	Right-handed alpha
Helix 12	AB3	A	208	218	Right-handed alpha
Helix 13	AB4	A	219	223	Right-handed 310
Helix 14	AB5	A	230	254	Right-handed alpha
Helix 15	AB6	A	273	275	Right-handed 310
Helix 16	AB7	A	276	288	Right-handed alpha
Helix 17	AB8	A	288	298	Right-handed alpha
Helix 18	AB9	A	363	378	Right-handed alpha
Helix 19	AC1	A	395	413	Right-handed alpha
Helix 20	AC2	A	430	437	Right-handed 310
Helix 21	AC3	A	454	467	Right-handed alpha
Helix 22	AC4	A	470	478	Right-handed 310
Helix 23	AC5	B	15	20	Right-handed alpha
Helix 24	AC6	B	31	39	Right-handed alpha
Helix 25	AC7	B	39	45	Right-handed alpha
Helix 26	AC8	B	52	56	Right-handed 310
Helix 27	AC9	B	58	73	Right-handed alpha
Helix 28	AD1	B	83	88	Right-handed alpha
Helix 29	AD2	B	112	123	Right-handed alpha
Helix 30	AD3	B	124	141	Right-handed alpha
Helix 31	AD4	B	160	167	Right-handed alpha
Helix 32	AD5	B	174	179	Right-handed 310
Helix 33	AD6	B	180	197	Right-handed alpha
Helix 34	AD7	B	208	218	Right-handed alpha
Helix 35	AD8	B	219	223	Right-handed 310
Helix 36	AD9	B	230	254	Right-handed alpha
Helix 37	AE1	B	273	275	Right-handed 310
Helix 38	AE2	B	276	288	Right-handed alpha
Helix 39	AE3	B	288	298	Right-handed alpha
Helix 40	AE4	B	363	378	Right-handed alpha
Helix 41	AE5	B	395	413	Right-handed alpha
Helix 42	AE6	B	430	437	Right-handed 310
Helix 43	AE7	B	454	467	Right-handed alpha
Helix 44	AE8	B	470	477	Right-handed 310
Helix 45	AE9	C	15	20	Right-handed alpha
Helix 46	AF1	C	31	39	Right-handed alpha
Helix 47	AF2	C	39	45	Right-handed alpha
Helix 48	AF3	C	52	56	Right-handed 310
Helix 49	AF4	C	58	73	Right-handed alpha
Helix 50	AF5	C	83	88	Right-handed alpha
Helix 51	AF6	C	112	123	Right-handed alpha
Helix 52	AF7	C	124	141	Right-handed alpha
Helix 53	AF8	C	160	166	Right-handed alpha
Helix 54	AF9	C	174	179	Right-handed 310
Helix 55	AG1	C	180	197	Right-handed alpha
Helix 56	AG2	C	208	218	Right-handed alpha
Helix 57	AG3	C	219	223	Right-handed 310
Helix 58	AG4	C	230	254	Right-handed alpha
Helix 59	AG5	C	273	275	Right-handed 310
Helix 60	AG6	C	276	288	Right-handed alpha
Helix 61	AG7	C	288	298	Right-handed alpha
Helix 62	AG8	C	363	378	Right-handed alpha
Helix 63	AG9	C	395	413	Right-handed alpha
Helix 64	AH1	C	430	437	Right-handed 310
Helix 65	AH2	C	454	467	Right-handed alpha
Helix 66	AH3	C	470	478	Right-handed 310
Helix 67	AH4	C	482	487	Right-handed alpha
Helix 68	AH5	D	15	20	Right-handed alpha
Helix 69	AH6	D	31	39	Right-handed alpha
Helix 70	AH7	D	39	45	Right-handed alpha
Helix 71	AH8	D	52	56	Right-handed 310
Helix 72	AH9	D	58	73	Right-handed alpha
Helix 73	AI1	D	83	88	Right-handed alpha
Helix 74	AI2	D	112	123	Right-handed alpha
Helix 75	AI3	D	124	141	Right-handed alpha
Helix 76	AI4	D	160	167	Right-handed alpha
Helix 77	AI5	D	174	179	Right-handed 310
Helix 78	AI6	D	180	197	Right-handed alpha
Helix 79	AI7	D	208	218	Right-handed alpha
Helix 80	AI8	D	219	223	Right-handed 310
Helix 81	AI9	D	230	254	Right-handed alpha
Helix 82	AJ1	D	273	275	Right-handed 310
Helix 83	AJ2	D	276	288	Right-handed alpha
Helix 84	AJ3	D	288	298	Right-handed alpha
Helix 85	AJ4	D	363	378	Right-handed alpha
Helix 86	AJ5	D	395	413	Right-handed alpha
Helix 87	AJ6	D	430	434	Right-handed 310
Helix 88	AJ7	D	454	467	Right-handed alpha
Helix 89	AJ8	D	470	478	Right-handed 310
Helix 90	AJ9	D	482	488	Right-handed alpha

There are 24 sheets in PDB entry 9LHI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	3	first strand
Strand 2	A	468	469	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	13	first strand
Strand 2	A	77	81	parallel
Strand 3	A	144	148	parallel
Strand 4	A	202	207	parallel
Strand 5	A	260	265	parallel
Strand 6	A	315	318	parallel
Strand 7	A	381	385	parallel
Strand 8	A	417	422	parallel
Strand 9	A	9	13	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	102	first strand
Strand 2	A	105	110	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	271	first strand
Strand 2	A	323	328	parallel
Strand 3	A	331	334	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	299	300	first strand
Strand 2	A	303	304	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	442	444	first strand
Strand 2	A	451	453	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	3	first strand
Strand 2	B	468	469	anti-parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	13	first strand
Strand 2	B	77	81	parallel
Strand 3	B	144	148	parallel
Strand 4	B	202	207	parallel
Strand 5	B	260	265	parallel
Strand 6	B	315	318	parallel
Strand 7	B	381	385	parallel
Strand 8	B	417	422	parallel
Strand 9	B	9	13	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	102	first strand
Strand 2	B	105	110	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	271	first strand
Strand 2	B	323	328	parallel
Strand 3	B	331	334	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	299	300	first strand
Strand 2	B	303	304	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	442	444	first strand
Strand 2	B	451	453	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	3	first strand
Strand 2	C	468	469	anti-parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	9	13	first strand
Strand 2	C	77	81	parallel
Strand 3	C	144	148	parallel
Strand 4	C	202	207	parallel
Strand 5	C	260	265	parallel
Strand 6	C	315	318	parallel
Strand 7	C	381	385	parallel
Strand 8	C	417	422	parallel
Strand 9	C	9	13	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	102	first strand
Strand 2	C	105	110	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	269	271	first strand
Strand 2	C	323	328	parallel
Strand 3	C	331	334	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	299	300	first strand
Strand 2	C	303	304	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	442	444	first strand
Strand 2	C	451	453	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	3	first strand
Strand 2	D	468	469	anti-parallel

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There are 9 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	13	first strand
Strand 2	D	77	81	parallel
Strand 3	D	144	148	parallel
Strand 4	D	202	207	parallel
Strand 5	D	260	265	parallel
Strand 6	D	315	318	parallel
Strand 7	D	381	385	parallel
Strand 8	D	417	422	parallel
Strand 9	D	9	13	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	98	102	first strand
Strand 2	D	105	110	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	269	271	first strand
Strand 2	D	323	327	parallel
Strand 3	D	332	334	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	299	300	first strand
Strand 2	D	303	304	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	442	444	first strand
Strand 2	D	451	453	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9LHI

Analysis of interatomic Contacts of Structural Units in PDB entry:
9LHI