Analysis of interatomic Contacts of Structural Units in PDB entry:
9LHR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LHR entry

There are 3 chains in PDB entry 9LHR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 32PRO 255
B
 SER 32ALA 256
C
 SER 32PRO 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 9LHR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 44Right-handed 310
Helix 2
AA2
A
70 72Right-handed 310
Helix 3
AA3
A
107 129Right-handed alpha
Helix 4
AA4
A
197 199Right-handed 310
Helix 5
AA5
B
38 44Right-handed 310
Helix 6
AA6
B
70 72Right-handed 310
Helix 7
AA7
B
107 129Right-handed alpha
Helix 8
AA8
B
197 199Right-handed 310
Helix 9
AA9
C
38 42Right-handed 310
Helix 10
AB1
C
70 72Right-handed 310
Helix 11
AB2
C
107 129Right-handed alpha
Helix 12
AB3
C
197 199Right-handed 310
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There are 15 sheets in PDB entry 9LHR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 94first strand
Strand 2
A
59 61parallel
Strand 3
A
251 253parallel
Strand 4
A
234 241parallel
Strand 5
A
46 48parallel
Strand 6
A
64 66parallel
Strand 7
A
99 101parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 94first strand
Strand 2
A
59 61parallel
Strand 3
A
251 253parallel
Strand 4
A
234 241parallel
Strand 5
A
216 223parallel
Strand 6
A
201 205parallel
Strand 7
A
174 178parallel
Strand 8
A
150 154parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 75first strand
Strand 2
A
52 55parallel
Strand 3
A
245 248parallel
Strand 4
A
227 229parallel
Strand 5
A
209 211parallel
Strand 6
A
182 184parallel
Strand 7
A
158 160parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 81first strand
Strand 2
A
88 89anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 147first strand
Strand 2
A
164 167parallel
Strand 3
A
190 193parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 94first strand
Strand 2
B
59 61parallel
Strand 3
B
251 253parallel
Strand 4
B
234 241parallel
Strand 5
B
46 48parallel
Strand 6
B
64 66parallel
Strand 7
B
99 101parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 94first strand
Strand 2
B
59 61parallel
Strand 3
B
251 253parallel
Strand 4
B
234 241parallel
Strand 5
B
216 223parallel
Strand 6
B
201 205parallel
Strand 7
B
174 178parallel
Strand 8
B
150 154parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 75first strand
Strand 2
B
52 55parallel
Strand 3
B
245 248parallel
Strand 4
B
227 229parallel
Strand 5
B
209 211parallel
Strand 6
B
182 184parallel
Strand 7
B
158 160parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 81first strand
Strand 2
B
88 89anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 147first strand
Strand 2
B
164 167parallel
Strand 3
B
190 193parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 61first strand
Strand 2
C
251 253parallel
Strand 3
C
234 241parallel
Strand 4
C
44 48parallel
Strand 5
C
63 66parallel
Strand 6
C
99 101parallel
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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 61first strand
Strand 2
C
251 253parallel
Strand 3
C
234 241parallel
Strand 4
C
216 223parallel
Strand 5
C
201 205parallel
Strand 6
C
174 178parallel
Strand 7
C
150 154parallel
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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
74 75first strand
Strand 2
C
52 55parallel
Strand 3
C
245 248parallel
Strand 4
C
227 229parallel
Strand 5
C
209 211parallel
Strand 6
C
182 184parallel
Strand 7
C
158 160parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
80 81first strand
Strand 2
C
88 89anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
146 147first strand
Strand 2
C
164 167parallel
Strand 3
C
190 193parallel
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