Analysis of interatomic Contacts of Structural Units in PDB entry:
9LHS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LHS entry

There is 1 chain in PDB entry 9LHS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 30SER 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 9LHS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 44Right-handed 310
Helix 2
AA2
A
70 72Right-handed 310
Helix 3
AA3
A
105 127Right-handed alpha
Helix 4
AA4
A
136 140Right-handed 310
Helix 5
AA5
A
196 198Right-handed 310
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There are 5 sheets in PDB entry 9LHS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
250 252parallel
Strand 3
A
233 240parallel
Strand 4
A
46 48parallel
Strand 5
A
64 66parallel
Strand 6
A
97 99parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
250 252parallel
Strand 3
A
233 240parallel
Strand 4
A
215 222parallel
Strand 5
A
200 204parallel
Strand 6
A
173 177parallel
Strand 7
A
149 153parallel
Strand 8
A
133 134parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 75first strand
Strand 2
A
52 55parallel
Strand 3
A
244 247parallel
Strand 4
A
226 228parallel
Strand 5
A
208 210parallel
Strand 6
A
181 183parallel
Strand 7
A
157 159parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 81first strand
Strand 2
A
88 89anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 146first strand
Strand 2
A
163 166parallel
Strand 3
A
189 192parallel
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