Analysis of interatomic Contacts of Structural Units in PDB entry:
9LHV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LHV entry

There are 2 chains in PDB entry 9LHV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 35LEU 834
B
 PRO 35LEU 834
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 9LHV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 62Right-handed alpha
Helix 2
AA2
A
69 80Right-handed alpha
Helix 3
AA3
A
80 92Right-handed alpha
Helix 4
AA4
A
94 98Right-handed 310
Helix 5
AA5
A
99 125Right-handed alpha
Helix 6
AA6
A
126 128Right-handed 310
Helix 7
AA7
A
129 141Right-handed alpha
Helix 8
AA8
A
149 158Right-handed alpha
Helix 9
AA9
A
162 164Right-handed 310
Helix 10
AB1
A
165 180Right-handed alpha
Helix 11
AB2
A
180 197Right-handed alpha
Helix 12
AB3
A
202 216Right-handed alpha
Helix 13
AB4
A
217 234Right-handed alpha
Helix 14
AB5
A
238 251Right-handed alpha
Helix 15
AB6
A
251 263Right-handed alpha
Helix 16
AB7
A
272 288Right-handed alpha
Helix 17
AB8
A
288 302Right-handed alpha
Helix 18
AB9
A
306 322Right-handed alpha
Helix 19
AC1
A
326 337Right-handed alpha
Helix 20
AC2
A
339 367Right-handed alpha
Helix 21
AC3
A
368 370Right-handed 310
Helix 22
AC4
A
371 405Right-handed alpha
Helix 23
AC5
A
411 436Right-handed alpha
Helix 24
AC6
A
439 473Right-handed alpha
Helix 25
AC7
A
480 503Right-handed alpha
Helix 26
AC8
A
517 539Right-handed alpha
Helix 27
AC9
A
637 653Right-handed alpha
Helix 28
AD1
A
654 682Right-handed alpha
Helix 29
AD2
A
688 711Right-handed alpha
Helix 30
AD3
A
745 757Right-handed alpha
Helix 31
AD4
A
783 794Right-handed alpha
Helix 32
AD5
A
798 812Right-handed alpha
Helix 33
AD6
B
42 62Right-handed alpha
Helix 34
AD7
B
69 80Right-handed alpha
Helix 35
AD8
B
80 92Right-handed alpha
Helix 36
AD9
B
94 98Right-handed 310
Helix 37
AE1
B
99 125Right-handed alpha
Helix 38
AE2
B
129 141Right-handed alpha
Helix 39
AE3
B
149 159Right-handed alpha
Helix 40
AE4
B
162 167Right-handed 310
Helix 41
AE5
B
168 194Right-handed alpha
Helix 42
AE6
B
202 216Right-handed alpha
Helix 43
AE7
B
217 234Right-handed alpha
Helix 44
AE8
B
238 250Right-handed alpha
Helix 45
AE9
B
251 263Right-handed alpha
Helix 46
AF1
B
272 288Right-handed alpha
Helix 47
AF2
B
288 302Right-handed alpha
Helix 48
AF3
B
306 318Right-handed alpha
Helix 49
AF4
B
326 337Right-handed alpha
Helix 50
AF5
B
339 367Right-handed alpha
Helix 51
AF6
B
368 370Right-handed 310
Helix 52
AF7
B
371 405Right-handed alpha
Helix 53
AF8
B
411 436Right-handed alpha
Helix 54
AF9
B
439 473Right-handed alpha
Helix 55
AG1
B
480 503Right-handed alpha
Helix 56
AG2
B
517 539Right-handed alpha
Helix 57
AG3
B
639 653Right-handed alpha
Helix 58
AG4
B
654 682Right-handed alpha
Helix 59
AG5
B
688 711Right-handed alpha
Helix 60
AG6
B
745 757Right-handed alpha
Helix 61
AG7
B
783 794Right-handed alpha
Helix 62
AG8
B
798 812Right-handed alpha
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There are 2 sheets in PDB entry 9LHV. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
815 817first strand
Strand 2
A
831 833anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
781 782first strand
Strand 2
B
830 833anti-parallel
Strand 3
B
815 817anti-parallel
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