Analysis of interatomic Contacts of Structural Units in PDB entry:
9LI5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LI5 entry

There is 1 chain in PDB entry 9LI5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 1500
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 9LI5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 28Right-handed 310
Helix 2
AA2
A
29 34Right-handed alpha
Helix 3
AA3
A
38 59Right-handed alpha
Helix 4
AA4
A
72 95Right-handed alpha
Helix 5
AA5
A
107 131Right-handed alpha
Helix 6
AA6
A
140 145Right-handed alpha
Helix 7
AA7
A
147 162Right-handed alpha
Helix 8
AA8
A
164 168Right-handed 310
Helix 9
AA9
A
172 192Right-handed alpha
Helix 10
AB1
A
233 238Right-handed alpha
Helix 11
AB2
A
242 252Right-handed alpha
Helix 12
AB3
A
267 272Right-handed alpha
Helix 13
AB4
A
272 277Right-handed alpha
Helix 14
AB5
A
289 297Right-handed alpha
Helix 15
AB6
A
299 310Right-handed alpha
Helix 16
AB7
A
318 331Right-handed alpha
Helix 17
AB8
A
335 343Right-handed 310
Helix 18
AB9
A
344 356Right-handed alpha
Helix 19
AC1
A
360 363Right-handed 310
Helix 20
AC2
A
364 384Right-handed alpha
Helix 21
AC3
A
387 398Right-handed alpha
Helix 22
AC4
A
418 436Right-handed alpha
Helix 23
AC5
A
439 441Right-handed 310
Helix 24
AC6
A
442 450Right-handed alpha
Helix 25
AC7
A
452 471Right-handed alpha
Helix 26
AC8
A
474 486Right-handed alpha
Helix 27
AC9
A
487 495Right-handed alpha
Helix 28
AD1
A
498 513Right-handed alpha
Helix 29
AD2
A
515 529Right-handed alpha
Helix 30
AD3
A
536 546Right-handed alpha
Helix 31
AD4
A
558 562Right-handed 310
Helix 32
AD5
A
567 572Right-handed 310
Helix 33
AD6
A
573 594Right-handed alpha
Helix 34
AD7
A
654 664Right-handed alpha
Helix 35
AD8
A
693 700Right-handed alpha
Helix 36
AD9
A
706 717Right-handed alpha
Helix 37
AE1
A
718 725Right-handed alpha
Helix 38
AE2
A
741 757Right-handed alpha
Helix 39
AE3
A
771 782Right-handed alpha
Helix 40
AE4
A
785 789Right-handed 310
Helix 41
AE5
A
798 805Right-handed 310
Helix 42
AE6
A
821 828Right-handed alpha
Helix 43
AE7
A
829 839Right-handed alpha
Helix 44
AE8
A
904 916Right-handed alpha
Helix 45
AE9
A
917 941Right-handed alpha
Helix 46
AF1
A
941 946Right-handed alpha
Helix 47
AF2
A
955 964Right-handed alpha
Helix 48
AF3
A
967 972Right-handed alpha
Helix 49
AF4
A
979 992Right-handed alpha
Helix 50
AF5
A
993 996Right-handed 310
Helix 51
AF6
A
1017 1022Right-handed alpha
Helix 52
AF7
A
1025 1030Right-handed alpha
Helix 53
AF8
A
1030 1056Right-handed alpha
Helix 54
AF9
A
1056 1062Right-handed alpha
Helix 55
AG1
A
1063 1066Right-handed 310
Helix 56
AG2
A
1067 1072Right-handed alpha
Helix 57
AG3
A
1085 1090Right-handed alpha
Helix 58
AG4
A
1092 1097Right-handed alpha
Helix 59
AG5
A
1099 1104Right-handed alpha
Helix 60
AG6
A
1105 1111Right-handed alpha
Helix 61
AG7
A
1112 1114Right-handed 310
Helix 62
AG8
A
1118 1139Right-handed alpha
Helix 63
AG9
A
1139 1147Right-handed alpha
Helix 64
AH1
A
1157 1165Right-handed alpha
Helix 65
AH2
A
1177 1182Right-handed alpha
Helix 66
AH3
A
1188 1200Right-handed alpha
Helix 67
AH4
A
1207 1212Right-handed alpha
Helix 68
AH5
A
1212 1217Right-handed alpha
Helix 69
AH6
A
1281 1290Right-handed alpha
Helix 70
AH7
A
1311 1316Right-handed alpha
Helix 71
AH8
A
1317 1319Right-handed 310
Helix 72
AH9
A
1344 1356Right-handed alpha
Helix 73
AI1
A
1357 1362Right-handed alpha
Helix 74
AI2
A
1373 1377Right-handed 310
Helix 75
AI3
A
1380 1396Right-handed alpha
Helix 76
AI4
A
1410 1425Right-handed alpha
Helix 77
AI5
A
1438 1443Right-handed 310
Helix 78
AI6
A
1459 1466Right-handed alpha
Helix 79
AI7
A
1469 1477Right-handed alpha
Helix 80
AI8
A
1479 1500Right-handed alpha
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There are 6 sheets in PDB entry 9LI5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
198 199anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
635 639first strand
Strand 2
A
614 619anti-parallel
Strand 3
A
675 676anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
760 763first strand
Strand 2
A
791 795parallel
Strand 3
A
644 649parallel
Strand 4
A
807 812parallel
Strand 5
A
815 816anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1265 1266first strand
Strand 2
A
1242 1248anti-parallel
Strand 3
A
1297 1300anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1399 1403first strand
Strand 2
A
1429 1433parallel
Strand 3
A
1271 1275parallel
Strand 4
A
1445 1449parallel
Strand 5
A
1454 1456anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1331 1332first strand
Strand 2
A
1371 1372anti-parallel
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