Analysis of interatomic Contacts of Structural Units in PDB entry:
9LI7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9LI7 entry

There are 2 chains in PDB entry 9LI7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 4	PRO 1460
B	GLU 4	PRO 1460

There are140 helices in PDB entry 9LI7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	10	Right-handed alpha
Helix 2	AA2	A	29	37	Right-handed alpha
Helix 3	AA3	A	41	56	Right-handed alpha
Helix 4	AA4	A	70	75	Right-handed alpha
Helix 5	AA5	A	76	94	Right-handed alpha
Helix 6	AA6	A	107	128	Right-handed alpha
Helix 7	AA7	A	141	162	Right-handed alpha
Helix 8	AA8	A	169	192	Right-handed alpha
Helix 9	AA9	A	275	280	Right-handed alpha
Helix 10	AB1	A	292	297	Right-handed alpha
Helix 11	AB2	A	309	314	Right-handed alpha
Helix 12	AB3	A	323	331	Right-handed alpha
Helix 13	AB4	A	335	339	Right-handed 310
Helix 14	AB5	A	344	352	Right-handed alpha
Helix 15	AB6	A	363	373	Right-handed alpha
Helix 16	AB7	A	375	380	Right-handed alpha
Helix 17	AB8	A	410	415	Right-handed alpha
Helix 18	AB9	A	422	427	Right-handed alpha
Helix 19	AC1	A	431	436	Right-handed alpha
Helix 20	AC2	A	440	445	Right-handed alpha
Helix 21	AC3	A	447	453	Right-handed alpha
Helix 22	AC4	A	454	486	Right-handed alpha
Helix 23	AC5	A	487	492	Right-handed alpha
Helix 24	AC6	A	496	512	Right-handed alpha
Helix 25	AC7	A	512	517	Right-handed alpha
Helix 26	AC8	A	519	546	Right-handed alpha
Helix 27	AC9	A	552	559	Right-handed alpha
Helix 28	AD1	A	563	568	Right-handed alpha
Helix 29	AD2	A	568	590	Right-handed alpha
Helix 30	AD3	A	654	664	Right-handed alpha
Helix 31	AD4	A	693	700	Right-handed alpha
Helix 32	AD5	A	705	716	Right-handed alpha
Helix 33	AD6	A	717	724	Right-handed alpha
Helix 34	AD7	A	744	756	Right-handed alpha
Helix 35	AD8	A	771	782	Right-handed alpha
Helix 36	AD9	A	801	805	Right-handed 310
Helix 37	AE1	A	821	829	Right-handed alpha
Helix 38	AE2	A	829	838	Right-handed alpha
Helix 39	AE3	A	906	916	Right-handed alpha
Helix 40	AE4	A	925	940	Right-handed alpha
Helix 41	AE5	A	941	946	Right-handed alpha
Helix 42	AE6	A	957	981	Right-handed alpha
Helix 43	AE7	A	981	1001	Right-handed alpha
Helix 44	AE8	A	1004	1011	Right-handed alpha
Helix 45	AE9	A	1012	1018	Right-handed alpha
Helix 46	AF1	A	1024	1030	Right-handed alpha
Helix 47	AF2	A	1030	1043	Right-handed alpha
Helix 48	AF3	A	1044	1056	Right-handed alpha
Helix 49	AF4	A	1056	1064	Right-handed alpha
Helix 50	AF5	A	1065	1067	Right-handed 310
Helix 51	AF6	A	1068	1073	Right-handed alpha
Helix 52	AF7	A	1077	1091	Right-handed alpha
Helix 53	AF8	A	1092	1097	Right-handed alpha
Helix 54	AF9	A	1125	1131	Right-handed alpha
Helix 55	AG1	A	1133	1144	Right-handed alpha
Helix 56	AG2	A	1152	1157	Right-handed alpha
Helix 57	AG3	A	1163	1167	Right-handed 310
Helix 58	AG4	A	1172	1174	Right-handed 310
Helix 59	AG5	A	1175	1187	Right-handed alpha
Helix 60	AG6	A	1188	1197	Right-handed alpha
Helix 61	AG7	A	1201	1207	Right-handed alpha
Helix 62	AG8	A	1207	1214	Right-handed alpha
Helix 63	AG9	A	1284	1290	Right-handed alpha
Helix 64	AH1	A	1306	1310	Right-handed 310
Helix 65	AH2	A	1311	1317	Right-handed alpha
Helix 66	AH3	A	1344	1354	Right-handed alpha
Helix 67	AH4	A	1357	1363	Right-handed alpha
Helix 68	AH5	A	1380	1385	Right-handed alpha
Helix 69	AH6	A	1385	1393	Right-handed alpha
Helix 70	AH7	A	1413	1424	Right-handed alpha
Helix 71	AH8	B	5	10	Right-handed alpha
Helix 72	AH9	B	29	37	Right-handed alpha
Helix 73	AI1	B	41	56	Right-handed alpha
Helix 74	AI2	B	70	75	Right-handed alpha
Helix 75	AI3	B	76	94	Right-handed alpha
Helix 76	AI4	B	107	128	Right-handed alpha
Helix 77	AI5	B	141	162	Right-handed alpha
Helix 78	AI6	B	169	192	Right-handed alpha
Helix 79	AI7	B	275	280	Right-handed alpha
Helix 80	AI8	B	292	297	Right-handed alpha
Helix 81	AI9	B	309	314	Right-handed alpha
Helix 82	AJ1	B	323	331	Right-handed alpha
Helix 83	AJ2	B	335	339	Right-handed 310
Helix 84	AJ3	B	344	352	Right-handed alpha
Helix 85	AJ4	B	363	373	Right-handed alpha
Helix 86	AJ5	B	375	380	Right-handed alpha
Helix 87	AJ6	B	410	415	Right-handed alpha
Helix 88	AJ7	B	422	427	Right-handed alpha
Helix 89	AJ8	B	431	436	Right-handed alpha
Helix 90	AJ9	B	440	445	Right-handed alpha
Helix 91	AK1	B	447	453	Right-handed alpha
Helix 92	AK2	B	454	486	Right-handed alpha
Helix 93	AK3	B	487	492	Right-handed alpha
Helix 94	AK4	B	496	512	Right-handed alpha
Helix 95	AK5	B	512	517	Right-handed alpha
Helix 96	AK6	B	519	546	Right-handed alpha
Helix 97	AK7	B	552	559	Right-handed alpha
Helix 98	AK8	B	563	568	Right-handed alpha
Helix 99	AK9	B	568	590	Right-handed alpha
Helix 100	AL1	B	654	664	Right-handed alpha
Helix 101	AL2	B	693	700	Right-handed alpha
Helix 102	AL3	B	705	716	Right-handed alpha
Helix 103	AL4	B	717	724	Right-handed alpha
Helix 104	AL5	B	744	756	Right-handed alpha
Helix 105	AL6	B	771	782	Right-handed alpha
Helix 106	AL7	B	801	805	Right-handed 310
Helix 107	AL8	B	821	829	Right-handed alpha
Helix 108	AL9	B	829	838	Right-handed alpha
Helix 109	AM1	B	906	916	Right-handed alpha
Helix 110	AM2	B	925	940	Right-handed alpha
Helix 111	AM3	B	941	946	Right-handed alpha
Helix 112	AM4	B	957	981	Right-handed alpha
Helix 113	AM5	B	981	1001	Right-handed alpha
Helix 114	AM6	B	1004	1011	Right-handed alpha
Helix 115	AM7	B	1012	1018	Right-handed alpha
Helix 116	AM8	B	1024	1030	Right-handed alpha
Helix 117	AM9	B	1030	1043	Right-handed alpha
Helix 118	AN1	B	1044	1056	Right-handed alpha
Helix 119	AN2	B	1056	1064	Right-handed alpha
Helix 120	AN3	B	1065	1067	Right-handed 310
Helix 121	AN4	B	1068	1073	Right-handed alpha
Helix 122	AN5	B	1077	1091	Right-handed alpha
Helix 123	AN6	B	1092	1097	Right-handed alpha
Helix 124	AN7	B	1125	1131	Right-handed alpha
Helix 125	AN8	B	1133	1144	Right-handed alpha
Helix 126	AN9	B	1152	1157	Right-handed alpha
Helix 127	AO1	B	1163	1167	Right-handed 310
Helix 128	AO2	B	1172	1174	Right-handed 310
Helix 129	AO3	B	1175	1187	Right-handed alpha
Helix 130	AO4	B	1188	1197	Right-handed alpha
Helix 131	AO5	B	1201	1207	Right-handed alpha
Helix 132	AO6	B	1207	1214	Right-handed alpha
Helix 133	AO7	B	1284	1290	Right-handed alpha
Helix 134	AO8	B	1306	1310	Right-handed 310
Helix 135	AO9	B	1311	1317	Right-handed alpha
Helix 136	AP1	B	1344	1354	Right-handed alpha
Helix 137	AP2	B	1357	1363	Right-handed alpha
Helix 138	AP3	B	1380	1385	Right-handed alpha
Helix 139	AP4	B	1385	1393	Right-handed alpha
Helix 140	AP5	B	1413	1424	Right-handed alpha

There are 10 sheets in PDB entry 9LI7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	632	639	first strand
Strand 2	A	614	621	anti-parallel
Strand 3	A	675	676	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	760	764	first strand
Strand 2	A	791	795	parallel
Strand 3	A	644	648	parallel
Strand 4	A	807	812	parallel
Strand 5	A	815	820	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1259	1262	first strand
Strand 2	A	1242	1249	anti-parallel
Strand 3	A	1297	1302	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1272	1274	first strand
Strand 2	A	1431	1433	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1321	1322	first strand
Strand 2	A	1401	1402	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	632	639	first strand
Strand 2	B	614	621	anti-parallel
Strand 3	B	675	676	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	760	764	first strand
Strand 2	B	791	795	parallel
Strand 3	B	644	648	parallel
Strand 4	B	807	812	parallel
Strand 5	B	815	820	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1259	1262	first strand
Strand 2	B	1242	1249	anti-parallel
Strand 3	B	1297	1302	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1272	1274	first strand
Strand 2	B	1431	1433	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1321	1322	first strand
Strand 2	B	1401	1402	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9LI7

Analysis of interatomic Contacts of Structural Units in PDB entry:
9LI7