Analysis of interatomic Contacts of Structural Units in PDB entry:
9LIK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LIK entry

There are 2 chains in PDB entry 9LIK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ILE 12LEU 426
A
 MET 1TYR 427
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 9LIK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
13 28Right-handed alpha
Helix 2
AA2
B
35 39Right-handed 310
Helix 3
AA3
B
44 52Right-handed alpha
Helix 4
AA4
B
64 74Right-handed alpha
Helix 5
AA5
B
84 100Right-handed alpha
Helix 6
AA6
B
102 108Right-handed alpha
Helix 7
AA7
B
114 119Right-handed 310
Helix 8
AA8
B
170 183Right-handed alpha
Helix 9
AA9
B
196 199Right-handed 310
Helix 10
AB1
B
202 213Right-handed alpha
Helix 11
AB2
B
215 227Right-handed alpha
Helix 12
AB3
B
263 267Right-handed 310
Helix 13
AB4
B
292 294Right-handed 310
Helix 14
AB5
B
295 310Right-handed alpha
Helix 15
AB6
B
324 326Right-handed 310
Helix 16
AB7
B
327 342Right-handed alpha
Helix 17
AB8
B
346 360Right-handed alpha
Helix 18
AB9
B
361 373Right-handed alpha
Helix 19
AC1
B
387 416Right-handed alpha
Helix 20
AC2
B
417 419Right-handed 310
Helix 21
AC3
A
2 8Right-handed alpha
Helix 22
AC4
A
11 28Right-handed alpha
Helix 23
AC5
A
35 40Right-handed 310
Helix 24
AC6
A
44 52Right-handed alpha
Helix 25
AC7
A
64 74Right-handed alpha
Helix 26
AC8
A
84 97Right-handed alpha
Helix 27
AC9
A
102 107Right-handed alpha
Helix 28
AD1
A
114 119Right-handed 310
Helix 29
AD2
A
134 146Right-handed alpha
Helix 30
AD3
A
153 162Right-handed alpha
Helix 31
AD4
A
170 183Right-handed alpha
Helix 32
AD5
A
196 199Right-handed 310
Helix 33
AD6
A
202 204Right-handed 310
Helix 34
AD7
A
205 213Right-handed alpha
Helix 35
AD8
A
215 226Right-handed alpha
Helix 36
AD9
A
263 267Right-handed 310
Helix 37
AE1
A
292 294Right-handed 310
Helix 38
AE2
A
295 310Right-handed alpha
Helix 39
AE3
A
327 340Right-handed alpha
Helix 40
AE4
A
346 359Right-handed alpha
Helix 41
AE5
A
361 373Right-handed alpha
Helix 42
AE6
A
387 417Right-handed alpha
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There are 3 sheets in PDB entry 9LIK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
187 194first strand
Strand 2
B
231 237parallel
Strand 3
B
242 248anti-parallel
Strand 4
B
253 257anti-parallel
Strand 5
B
313 317parallel
Strand 6
B
273 277parallel
Strand 7
B
281 284anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 127first strand
Strand 2
A
167 169anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 194first strand
Strand 2
A
231 238parallel
Strand 3
A
241 248anti-parallel
Strand 4
A
253 257anti-parallel
Strand 5
A
313 317parallel
Strand 6
A
273 277parallel
Strand 7
A
281 283anti-parallel
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