Analysis of interatomic Contacts of Structural Units in PDB entry:
9LN6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LN6 entry

There are 2 chains in PDB entry 9LN6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 123PHE 1093
B
 MET 1GLN 75
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 9LN6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
123 137Right-handed alpha
Helix 2
AA2
A
157 164Right-handed alpha
Helix 3
AA3
A
188 203Right-handed alpha
Helix 4
AA4
A
218 222Right-handed alpha
Helix 5
AA5
A
229 234Right-handed alpha
Helix 6
AA6
A
238 242Right-handed 310
Helix 7
AA7
A
243 252Right-handed 310
Helix 8
AA8
A
260 264Right-handed 310
Helix 9
AA9
A
271 275Right-handed 310
Helix 10
AB1
A
285 294Right-handed alpha
Helix 11
AB2
A
311 319Right-handed alpha
Helix 12
AB3
A
331 343Right-handed alpha
Helix 13
AB4
A
345 359Right-handed alpha
Helix 14
AB5
A
359 366Right-handed alpha
Helix 15
AB6
A
368 386Right-handed alpha
Helix 16
AB7
A
388 394Right-handed alpha
Helix 17
AB8
A
395 407Right-handed alpha
Helix 18
AB9
A
420 438Right-handed alpha
Helix 19
AC1
A
444 450Right-handed alpha
Helix 20
AC2
A
453 463Right-handed alpha
Helix 21
AC3
A
480 494Right-handed alpha
Helix 22
AC4
A
508 517Right-handed alpha
Helix 23
AC5
A
522 524Right-handed 310
Helix 24
AC6
A
525 535Right-handed alpha
Helix 25
AC7
A
537 549Right-handed alpha
Helix 26
AC8
A
555 569Right-handed alpha
Helix 27
AC9
A
575 590Right-handed alpha
Helix 28
AD1
A
591 599Right-handed alpha
Helix 29
AD2
A
611 623Right-handed alpha
Helix 30
AD3
A
655 667Right-handed alpha
Helix 31
AD4
A
667 672Right-handed alpha
Helix 32
AD5
A
686 698Right-handed alpha
Helix 33
AD6
A
718 728Right-handed alpha
Helix 34
AD7
A
741 754Right-handed alpha
Helix 35
AD8
A
774 785Right-handed alpha
Helix 36
AD9
A
798 812Right-handed alpha
Helix 37
AE1
A
828 840Right-handed alpha
Helix 38
AE2
A
855 868Right-handed alpha
Helix 39
AE3
A
885 897Right-handed alpha
Helix 40
AE4
A
912 925Right-handed alpha
Helix 41
AE5
A
945 956Right-handed alpha
Helix 42
AE6
A
969 982Right-handed alpha
Helix 43
AE7
A
999 1001Right-handed 310
Helix 44
AE8
A
1002 1013Right-handed alpha
Helix 45
AE9
A
1026 1039Right-handed alpha
Helix 46
AF1
A
1051 1055Right-handed 310
Helix 47
AF2
A
1056 1070Right-handed alpha
Helix 48
AF3
B
24 37Right-handed alpha
Helix 49
AF4
B
39 41Right-handed 310
Helix 50
AF5
B
57 62Right-handed 310
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There are 5 sheets in PDB entry 9LN6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 217first strand
Strand 2
A
254 259parallel
Strand 3
A
302 307parallel
Strand 4
A
178 182parallel
Strand 5
A
323 326parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 228first strand
Strand 2
A
282 284anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
442 443first strand
Strand 2
A
475 478anti-parallel
Strand 3
A
466 468anti-parallel
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There are 17 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
604 609first strand
Strand 2
A
630 635parallel
Strand 3
A
677 681parallel
Strand 4
A
706 710parallel
Strand 5
A
733 735parallel
Strand 6
A
762 764parallel
Strand 7
A
790 792parallel
Strand 8
A
819 821parallel
Strand 9
A
847 849parallel
Strand 10
A
876 878parallel
Strand 11
A
904 906parallel
Strand 12
A
933 935parallel
Strand 13
A
961 963parallel
Strand 14
A
990 992parallel
Strand 15
A
1018 1020parallel
Strand 16
A
1047 1049parallel
Strand 17
A
1074 1076parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 16first strand
Strand 2
B
3 7anti-parallel
Strand 3
B
68 73parallel
Strand 4
B
43 47anti-parallel
Strand 5
B
50 51anti-parallel
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