Analysis of interatomic Contacts of Structural Units in PDB entry:
9LNM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LNM entry

There is 1 chain in PDB entry 9LNM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 43LYS 583
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9LNM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 49Right-handed alpha
Helix 2
AA2
A
50 53Right-handed 310
Helix 3
AA3
A
55 60Right-handed alpha
Helix 4
AA4
A
60 69Right-handed alpha
Helix 5
AA5
A
74 85Right-handed alpha
Helix 6
AA6
A
85 101Right-handed alpha
Helix 7
AA7
A
103 112Right-handed alpha
Helix 8
AA8
A
113 115Right-handed 310
Helix 9
AA9
A
116 133Right-handed alpha
Helix 10
AB1
A
134 146Right-handed alpha
Helix 11
AB2
A
186 195Right-handed alpha
Helix 12
AB3
A
210 231Right-handed alpha
Helix 13
AB4
A
244 258Right-handed alpha
Helix 14
AB5
A
262 272Right-handed alpha
Helix 15
AB6
A
276 280Right-handed 310
Helix 16
AB7
A
282 295Right-handed alpha
Helix 17
AB8
A
300 308Right-handed alpha
Helix 18
AB9
A
314 349Right-handed alpha
Helix 19
AC1
A
361 372Right-handed alpha
Helix 20
AC2
A
376 411Right-handed alpha
Helix 21
AC3
A
419 437Right-handed alpha
Helix 22
AC4
A
438 441Right-handed 310
Helix 23
AC5
A
443 455Right-handed alpha
Helix 24
AC6
A
458 475Right-handed alpha
Helix 25
AC7
A
477 489Right-handed alpha
Helix 26
AC8
A
494 519Right-handed alpha
Helix 27
AC9
A
526 528Right-handed 310
Helix 28
AD1
A
532 548Right-handed alpha
Helix 29
AD2
A
548 561Right-handed alpha
Helix 30
AD3
A
564 573Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9LNM.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
524 525first strand
Strand 2
A
529 530anti-parallel
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